Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF103-CHMP3A0A140T963 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF103-CHMP3A0A140T963 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF103-CHMP3A0A140T963 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
RNF103-CHMP3A0A140T963 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF103-CHMP3A0A140T963 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF103-CHMP3A0A140T963 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF103-CHMP3A0A140T963 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF103-CHMP3A0A140T963 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 PRELID1P1-202ENST00000567272 903 ntBASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 AC008608.2-201ENST00000606089 416 ntBASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 AL589182.2-201ENST00000619332 1049 ntBASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 AL355877.3-201ENST00000622820 899 ntBASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF103-CHMP3A0A140T963 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF103-CHMP3A0A140T963 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms