Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF11Q9Y3C5 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RNF11Q9Y3C5 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF11Q9Y3C5 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 AC108751.1-201ENST00000490852 363 ntBASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 AC010654.1-201ENST00000615722 808 ntBASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF11Q9Y3C5 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 RNA5SP419-201ENST00000515908 135 ntBASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 MIR4751-201ENST00000578027 74 ntBASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF11Q9Y3C5 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 AL596087.1-201ENST00000400979 1969 ntBASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF11Q9Y3C5 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms