Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
RIMBP3Q9UFD9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC25.39■■□□□ 1.65
RIMBP3Q9UFD9 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
RIMBP3Q9UFD9 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC25.39■■□□□ 1.65
RIMBP3Q9UFD9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
RIMBP3Q9UFD9 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RIMBP3Q9UFD9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC25.38■■□□□ 1.65
RIMBP3Q9UFD9 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RIMBP3Q9UFD9 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
RIMBP3Q9UFD9 PGGT1BP2-201ENST00000398621 1028 ntBASIC25.38■■□□□ 1.65
RIMBP3Q9UFD9 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC25.38■■□□□ 1.65
RIMBP3Q9UFD9 KRT18P25-201ENST00000508931 1278 ntBASIC25.38■■□□□ 1.65
RIMBP3Q9UFD9 SLED1-202ENST00000512051 380 ntBASIC25.38■■□□□ 1.65
RIMBP3Q9UFD9 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC25.38■■□□□ 1.65
RIMBP3Q9UFD9 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC25.38■■□□□ 1.65
RIMBP3Q9UFD9 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
RIMBP3Q9UFD9 ETV2-208ENST00000621247 941 ntTSL 5 BASIC25.38■■□□□ 1.65
RIMBP3Q9UFD9 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RIMBP3Q9UFD9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RIMBP3Q9UFD9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
RIMBP3Q9UFD9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RIMBP3Q9UFD9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RIMBP3Q9UFD9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
RIMBP3Q9UFD9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 AL354877.1-201ENST00000424412 413 ntBASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 AL353637.1-201ENST00000451571 732 ntBASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 AC093813.1-201ENST00000605066 256 ntBASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 AC244157.2-201ENST00000616239 1006 ntBASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 MIR4649-201ENST00000582839 64 ntBASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 MIR4321-201ENST00000592276 80 ntBASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RIMBP3Q9UFD9 DRD5P1-201ENST00000456605 1438 ntBASIC25.36■■□□□ 1.65
RIMBP3Q9UFD9 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
RIMBP3Q9UFD9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RIMBP3Q9UFD9 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
RIMBP3Q9UFD9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RIMBP3Q9UFD9 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RIMBP3Q9UFD9 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RIMBP3Q9UFD9 NEU3-205ENST00000531619 582 ntTSL 5 BASIC25.36■■□□□ 1.65
RIMBP3Q9UFD9 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC25.36■■□□□ 1.65
RIMBP3Q9UFD9 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC25.36■■□□□ 1.65
RIMBP3Q9UFD9 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC25.36■■□□□ 1.65
RIMBP3Q9UFD9 MIR6842-201ENST00000612539 65 ntBASIC25.36■■□□□ 1.65
RIMBP3Q9UFD9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC25.36■■□□□ 1.65
RIMBP3Q9UFD9 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC25.36■■□□□ 1.65
RIMBP3Q9UFD9 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RIMBP3Q9UFD9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
RIMBP3Q9UFD9 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
RIMBP3Q9UFD9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC25.35■■□□□ 1.65
RIMBP3Q9UFD9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RIMBP3Q9UFD9 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RIMBP3Q9UFD9 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
RIMBP3Q9UFD9 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC25.35■■□□□ 1.65
RIMBP3Q9UFD9 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC25.35■■□□□ 1.65
RIMBP3Q9UFD9 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC25.35■■□□□ 1.65
RIMBP3Q9UFD9 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC25.35■■□□□ 1.65
RIMBP3Q9UFD9 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC25.35■■□□□ 1.65
RIMBP3Q9UFD9 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC25.35■■□□□ 1.65
RIMBP3Q9UFD9 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
RIMBP3Q9UFD9 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
RIMBP3Q9UFD9 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
RIMBP3Q9UFD9 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RIMBP3Q9UFD9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RIMBP3Q9UFD9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC25.35■■□□□ 1.65
RIMBP3Q9UFD9 TP73-209ENST00000603362 1668 ntTSL 5 BASIC25.35■■□□□ 1.65
RIMBP3Q9UFD9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RIMBP3Q9UFD9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
RIMBP3Q9UFD9 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RIMBP3Q9UFD9 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RIMBP3Q9UFD9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
RIMBP3Q9UFD9 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RIMBP3Q9UFD9 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RIMBP3Q9UFD9 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RIMBP3Q9UFD9 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC25.34■■□□□ 1.65
RIMBP3Q9UFD9 CMC1-204ENST00000423894 549 ntTSL 2 BASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms