Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 WASH6P-202ENST00000359512 1437 ntBASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CUEDC1Q9NWM3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 AC008894.3-201ENST00000624324 3103 ntBASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 AL671277.1-201ENST00000429656 993 ntBASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 RARRES2P8-201ENST00000566335 367 ntBASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 NIFKP4-201ENST00000567275 1192 ntBASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 AL096865.1-201ENST00000606796 927 ntBASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 AC106028.4-201ENST00000614509 607 ntBASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 ME2P1-201ENST00000426028 1970 ntBASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CUEDC1Q9NWM3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 PCDHB19P-201ENST00000570871 2371 ntBASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 CEND1P1-201ENST00000451006 455 ntBASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 AL135744.1-201ENST00000565098 629 ntBASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 AC020765.3-201ENST00000613051 740 ntBASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 ELL2P1-201ENST00000413990 1906 ntBASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CUEDC1Q9NWM3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CUEDC1Q9NWM3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.9■□□□□ 0.14
CUEDC1Q9NWM3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CUEDC1Q9NWM3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms