Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS11Q9H270 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.59■□□□□ 0.25
VPS11Q9H270 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.59■□□□□ 0.25
VPS11Q9H270 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.59■□□□□ 0.25
VPS11Q9H270 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
VPS11Q9H270 SART3-203ENST00000546611 1184 ntBASIC16.59■□□□□ 0.25
VPS11Q9H270 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.59■□□□□ 0.25
VPS11Q9H270 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.59■□□□□ 0.25
VPS11Q9H270 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.59■□□□□ 0.25
VPS11Q9H270 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.59■□□□□ 0.25
VPS11Q9H270 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.59■□□□□ 0.25
VPS11Q9H270 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.59■□□□□ 0.25
VPS11Q9H270 MTDHP4-201ENST00000600287 670 ntBASIC16.59■□□□□ 0.25
VPS11Q9H270 REXO1L3P-201ENST00000622202 1288 ntBASIC16.59■□□□□ 0.25
VPS11Q9H270 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS11Q9H270 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.59■□□□□ 0.25
VPS11Q9H270 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.59■□□□□ 0.25
VPS11Q9H270 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
VPS11Q9H270 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VPS11Q9H270 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS11Q9H270 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS11Q9H270 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VPS11Q9H270 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.59■□□□□ 0.25
VPS11Q9H270 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS11Q9H270 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS11Q9H270 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VPS11Q9H270 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
VPS11Q9H270 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS11Q9H270 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS11Q9H270 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
VPS11Q9H270 AC099063.4-201ENST00000641099 1602 ntBASIC16.59■□□□□ 0.25
VPS11Q9H270 AC006058.4-201ENST00000624016 1670 ntBASIC16.59■□□□□ 0.25
VPS11Q9H270 CDC14C-201ENST00000428251 1719 ntBASIC16.59■□□□□ 0.25
VPS11Q9H270 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VPS11Q9H270 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.59■□□□□ 0.25
VPS11Q9H270 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.59■□□□□ 0.25
VPS11Q9H270 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
VPS11Q9H270 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
VPS11Q9H270 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
VPS11Q9H270 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
VPS11Q9H270 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
VPS11Q9H270 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
VPS11Q9H270 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.58■□□□□ 0.25
VPS11Q9H270 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
VPS11Q9H270 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
VPS11Q9H270 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
VPS11Q9H270 AC073347.1-201ENST00000421633 2643 ntBASIC16.58■□□□□ 0.25
VPS11Q9H270 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
VPS11Q9H270 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.58■□□□□ 0.24
VPS11Q9H270 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS11Q9H270 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
VPS11Q9H270 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS11Q9H270 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
VPS11Q9H270 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS11Q9H270 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.58■□□□□ 0.24
VPS11Q9H270 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
VPS11Q9H270 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS11Q9H270 ARMC10P1-201ENST00000313754 855 ntBASIC16.58■□□□□ 0.24
VPS11Q9H270 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS11Q9H270 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS11Q9H270 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
VPS11Q9H270 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.58■□□□□ 0.24
VPS11Q9H270 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.58■□□□□ 0.24
VPS11Q9H270 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
VPS11Q9H270 POU5F1P6-201ENST00000466990 990 ntBASIC16.58■□□□□ 0.24
VPS11Q9H270 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VPS11Q9H270 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS11Q9H270 AC004706.3-202ENST00000621574 984 ntBASIC16.58■□□□□ 0.24
VPS11Q9H270 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.58■□□□□ 0.24
VPS11Q9H270 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.58■□□□□ 0.24
VPS11Q9H270 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.58■□□□□ 0.24
VPS11Q9H270 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.58■□□□□ 0.24
VPS11Q9H270 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
VPS11Q9H270 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
VPS11Q9H270 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS11Q9H270 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.58■□□□□ 0.24
VPS11Q9H270 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS11Q9H270 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
VPS11Q9H270 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.58■□□□□ 0.24
VPS11Q9H270 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.58■□□□□ 0.24
VPS11Q9H270 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS11Q9H270 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS11Q9H270 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.58■□□□□ 0.24
VPS11Q9H270 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS11Q9H270 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
VPS11Q9H270 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS11Q9H270 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.57■□□□□ 0.24
VPS11Q9H270 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.57■□□□□ 0.24
VPS11Q9H270 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.57■□□□□ 0.24
VPS11Q9H270 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.57■□□□□ 0.24
VPS11Q9H270 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
VPS11Q9H270 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.57■□□□□ 0.24
VPS11Q9H270 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS11Q9H270 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.57■□□□□ 0.24
VPS11Q9H270 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms