Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 MIR4492-201ENST00000581627 80 ntBASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 AL139424.1-201ENST00000607572 797 ntBASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 NPAP1P7-201ENST00000613027 823 ntBASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 AC131009.4-201ENST00000624048 1740 ntBASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 AC064862.7-201ENST00000604520 867 ntBASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 AL589182.2-201ENST00000619332 1049 ntBASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 AL139288.1-201ENST00000623748 933 ntBASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 GPAA1P2-202ENST00000606848 1787 ntBASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 AC010491.1-201ENST00000563101 2797 ntBASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
COMMD4Q9H0A8 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
COMMD4Q9H0A8 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
COMMD4Q9H0A8 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
COMMD4Q9H0A8 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
COMMD4Q9H0A8 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.58□□□□□ -0.07
COMMD4Q9H0A8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
COMMD4Q9H0A8 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
COMMD4Q9H0A8 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
COMMD4Q9H0A8 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.58□□□□□ -0.07
COMMD4Q9H0A8 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
COMMD4Q9H0A8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COMMD4Q9H0A8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.58□□□□□ -0.08
COMMD4Q9H0A8 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.58□□□□□ -0.08
COMMD4Q9H0A8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COMMD4Q9H0A8 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COMMD4Q9H0A8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.58□□□□□ -0.08
COMMD4Q9H0A8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
COMMD4Q9H0A8 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COMMD4Q9H0A8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
COMMD4Q9H0A8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
COMMD4Q9H0A8 ATP5G2P1-201ENST00000433580 426 ntBASIC14.58□□□□□ -0.08
COMMD4Q9H0A8 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
COMMD4Q9H0A8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.58□□□□□ -0.08
COMMD4Q9H0A8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
COMMD4Q9H0A8 PAWRP1-201ENST00000451083 565 ntBASIC14.58□□□□□ -0.08
COMMD4Q9H0A8 KRT16P4-201ENST00000453883 522 ntBASIC14.58□□□□□ -0.08
COMMD4Q9H0A8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COMMD4Q9H0A8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.58□□□□□ -0.08
COMMD4Q9H0A8 AC091076.1-201ENST00000610741 619 ntBASIC14.58□□□□□ -0.08
COMMD4Q9H0A8 AP001350.2-201ENST00000625104 1094 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms