Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 AC061975.2-201ENST00000581722 295 ntBASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDK5RAP1Q96SZ6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 AD000864.1-201ENST00000624076 2295 ntBASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 BASP1P1-201ENST00000430708 665 ntBASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 AC055876.3-201ENST00000431496 288 ntBASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 HMGN1P19-201ENST00000436976 333 ntBASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 DUX4L27-201ENST00000554796 1261 ntBASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 DUT-210ENST00000559935 569 ntTSL 3 BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 AC138649.4-201ENST00000612222 287 ntBASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDK5RAP1Q96SZ6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 AC022211.2-201ENST00000585075 2527 ntBASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.99■□□□□ 0.31
CDK5RAP1Q96SZ6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms