Protein–RNA interactions for Protein: Q96JC9

EAF1, ELL-associated factor 1, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EAF1Q96JC9 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
EAF1Q96JC9 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EAF1Q96JC9 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
EAF1Q96JC9 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
EAF1Q96JC9 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EAF1Q96JC9 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EAF1Q96JC9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.47□□□□□ -0.25
EAF1Q96JC9 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EAF1Q96JC9 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EAF1Q96JC9 AC132872.4-202ENST00000622924 2756 ntBASIC13.47□□□□□ -0.25
EAF1Q96JC9 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EAF1Q96JC9 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EAF1Q96JC9 TSPY26P-202ENST00000565928 3884 ntBASIC13.47□□□□□ -0.25
EAF1Q96JC9 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
EAF1Q96JC9 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EAF1Q96JC9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
EAF1Q96JC9 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EAF1Q96JC9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
EAF1Q96JC9 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
EAF1Q96JC9 MIR574-201ENST00000385209 96 ntBASIC13.47□□□□□ -0.25
EAF1Q96JC9 MIR940-201ENST00000401276 94 ntBASIC13.47□□□□□ -0.25
EAF1Q96JC9 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
EAF1Q96JC9 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
EAF1Q96JC9 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.47□□□□□ -0.25
EAF1Q96JC9 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
EAF1Q96JC9 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.47□□□□□ -0.25
EAF1Q96JC9 KRT18P58-201ENST00000527480 1120 ntBASIC13.47□□□□□ -0.25
EAF1Q96JC9 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.47□□□□□ -0.25
EAF1Q96JC9 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
EAF1Q96JC9 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.47□□□□□ -0.25
EAF1Q96JC9 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.47□□□□□ -0.25
EAF1Q96JC9 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.47□□□□□ -0.25
EAF1Q96JC9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EAF1Q96JC9 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
EAF1Q96JC9 CYP2A7P1-201ENST00000595391 815 ntBASIC13.47□□□□□ -0.25
EAF1Q96JC9 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.47□□□□□ -0.25
EAF1Q96JC9 AC023141.13-201ENST00000604991 943 ntBASIC13.47□□□□□ -0.25
EAF1Q96JC9 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.47□□□□□ -0.25
EAF1Q96JC9 AL645728.2-201ENST00000641974 660 ntBASIC13.47□□□□□ -0.25
EAF1Q96JC9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
EAF1Q96JC9 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EAF1Q96JC9 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EAF1Q96JC9 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EAF1Q96JC9 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.47□□□□□ -0.25
EAF1Q96JC9 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
EAF1Q96JC9 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
EAF1Q96JC9 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EAF1Q96JC9 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EAF1Q96JC9 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.47□□□□□ -0.25
EAF1Q96JC9 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EAF1Q96JC9 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EAF1Q96JC9 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EAF1Q96JC9 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.46□□□□□ -0.25
EAF1Q96JC9 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EAF1Q96JC9 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
EAF1Q96JC9 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EAF1Q96JC9 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
EAF1Q96JC9 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EAF1Q96JC9 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EAF1Q96JC9 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EAF1Q96JC9 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
EAF1Q96JC9 BCAR1-209ENST00000546196 1340 ntBASIC13.46□□□□□ -0.25
EAF1Q96JC9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.46□□□□□ -0.25
EAF1Q96JC9 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
EAF1Q96JC9 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
EAF1Q96JC9 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EAF1Q96JC9 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
EAF1Q96JC9 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.46□□□□□ -0.25
EAF1Q96JC9 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
EAF1Q96JC9 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
EAF1Q96JC9 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.46□□□□□ -0.25
EAF1Q96JC9 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.25
EAF1Q96JC9 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.46□□□□□ -0.25
EAF1Q96JC9 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.46□□□□□ -0.25
EAF1Q96JC9 AL031432.2-201ENST00000566714 459 ntBASIC13.46□□□□□ -0.25
EAF1Q96JC9 AL928711.1-201ENST00000570165 459 ntBASIC13.46□□□□□ -0.25
EAF1Q96JC9 AC004877.2-201ENST00000623941 599 ntBASIC13.46□□□□□ -0.25
EAF1Q96JC9 AL139011.1-202ENST00000642063 584 ntBASIC13.46□□□□□ -0.25
EAF1Q96JC9 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.46□□□□□ -0.25
EAF1Q96JC9 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EAF1Q96JC9 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
EAF1Q96JC9 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EAF1Q96JC9 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.46□□□□□ -0.25
EAF1Q96JC9 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
EAF1Q96JC9 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
EAF1Q96JC9 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
EAF1Q96JC9 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
EAF1Q96JC9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
EAF1Q96JC9 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.46□□□□□ -0.26
EAF1Q96JC9 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
EAF1Q96JC9 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
EAF1Q96JC9 AC063926.3-201ENST00000624734 5658 ntBASIC13.46□□□□□ -0.26
EAF1Q96JC9 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
EAF1Q96JC9 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
EAF1Q96JC9 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
EAF1Q96JC9 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
EAF1Q96JC9 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
EAF1Q96JC9 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
EAF1Q96JC9 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
EAF1Q96JC9 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms