Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
ITCHQ96J02 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ITCHQ96J02 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
ITCHQ96J02 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ITCHQ96J02 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ITCHQ96J02 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ITCHQ96J02 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ITCHQ96J02 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.72■□□□□ 0.11
ITCHQ96J02 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ITCHQ96J02 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ITCHQ96J02 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.71■□□□□ 0.11
ITCHQ96J02 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.71■□□□□ 0.11
ITCHQ96J02 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ITCHQ96J02 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.71■□□□□ 0.11
ITCHQ96J02 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ITCHQ96J02 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ITCHQ96J02 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ITCHQ96J02 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.71■□□□□ 0.11
ITCHQ96J02 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ITCHQ96J02 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
ITCHQ96J02 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ITCHQ96J02 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.71■□□□□ 0.11
ITCHQ96J02 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ITCHQ96J02 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ITCHQ96J02 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ITCHQ96J02 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ITCHQ96J02 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ITCHQ96J02 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ITCHQ96J02 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ITCHQ96J02 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
ITCHQ96J02 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
ITCHQ96J02 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.71■□□□□ 0.11
ITCHQ96J02 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.71■□□□□ 0.11
ITCHQ96J02 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.71■□□□□ 0.11
ITCHQ96J02 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
ITCHQ96J02 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
ITCHQ96J02 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.71■□□□□ 0.11
ITCHQ96J02 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.71■□□□□ 0.11
ITCHQ96J02 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.71■□□□□ 0.11
ITCHQ96J02 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
ITCHQ96J02 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.71■□□□□ 0.11
ITCHQ96J02 AC025062.2-201ENST00000605477 670 ntBASIC15.71■□□□□ 0.11
ITCHQ96J02 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.71■□□□□ 0.11
ITCHQ96J02 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.71■□□□□ 0.11
ITCHQ96J02 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ITCHQ96J02 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.71■□□□□ 0.11
ITCHQ96J02 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ITCHQ96J02 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.71■□□□□ 0.11
ITCHQ96J02 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.71■□□□□ 0.11
ITCHQ96J02 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ITCHQ96J02 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ITCHQ96J02 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.71■□□□□ 0.11
ITCHQ96J02 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.71■□□□□ 0.11
ITCHQ96J02 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ITCHQ96J02 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ITCHQ96J02 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.1
ITCHQ96J02 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ITCHQ96J02 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.7■□□□□ 0.1
ITCHQ96J02 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ITCHQ96J02 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ITCHQ96J02 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ITCHQ96J02 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ITCHQ96J02 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ITCHQ96J02 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.7■□□□□ 0.1
ITCHQ96J02 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
ITCHQ96J02 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ITCHQ96J02 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ITCHQ96J02 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
ITCHQ96J02 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ITCHQ96J02 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ITCHQ96J02 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
ITCHQ96J02 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ITCHQ96J02 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
ITCHQ96J02 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
ITCHQ96J02 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.7■□□□□ 0.1
ITCHQ96J02 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ITCHQ96J02 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
ITCHQ96J02 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
ITCHQ96J02 ARMC10P1-201ENST00000313754 855 ntBASIC15.7■□□□□ 0.1
ITCHQ96J02 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ITCHQ96J02 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ITCHQ96J02 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.7■□□□□ 0.1
ITCHQ96J02 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ITCHQ96J02 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ITCHQ96J02 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.7■□□□□ 0.1
ITCHQ96J02 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ITCHQ96J02 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.7■□□□□ 0.1
ITCHQ96J02 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ITCHQ96J02 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.7■□□□□ 0.1
ITCHQ96J02 AC091304.2-201ENST00000564639 760 ntBASIC15.7■□□□□ 0.1
ITCHQ96J02 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.7■□□□□ 0.1
ITCHQ96J02 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.7■□□□□ 0.1
ITCHQ96J02 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.7■□□□□ 0.1
ITCHQ96J02 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.7■□□□□ 0.1
ITCHQ96J02 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.7■□□□□ 0.1
ITCHQ96J02 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ITCHQ96J02 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.7■□□□□ 0.1
ITCHQ96J02 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ITCHQ96J02 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ITCHQ96J02 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms