Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATL1Q8WXF7 LINC02199-201ENST00000506655 2702 ntBASIC16.1■□□□□ 0.17
ATL1Q8WXF7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 KRT18P3-201ENST00000451602 1288 ntBASIC16.1■□□□□ 0.17
ATL1Q8WXF7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 SLC25A1P1-201ENST00000528351 927 ntBASIC16.1■□□□□ 0.17
ATL1Q8WXF7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 AC018845.2-201ENST00000568326 409 ntBASIC16.1■□□□□ 0.17
ATL1Q8WXF7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATL1Q8WXF7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 MTHFR-217ENST00000641820 1569 ntBASIC16.09■□□□□ 0.17
ATL1Q8WXF7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 KRT18P2-201ENST00000447938 1258 ntBASIC16.09■□□□□ 0.17
ATL1Q8WXF7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 AC140113.2-201ENST00000604370 208 ntBASIC16.09■□□□□ 0.17
ATL1Q8WXF7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATL1Q8WXF7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.08■□□□□ 0.17
ATL1Q8WXF7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.08■□□□□ 0.17
ATL1Q8WXF7 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.08■□□□□ 0.17
ATL1Q8WXF7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.08■□□□□ 0.17
ATL1Q8WXF7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ATL1Q8WXF7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ATL1Q8WXF7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATL1Q8WXF7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATL1Q8WXF7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
ATL1Q8WXF7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATL1Q8WXF7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms