Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 AL450487.1-201ENST00000426799 995 ntBASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 EMBP1-201ENST00000458200 901 ntBASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 AC139887.3-201ENST00000568585 713 ntBASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 AC126177.1-201ENST00000547829 2218 ntBASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 GGT3P-204ENST00000453783 1664 ntBASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 AC126755.1-201ENST00000525846 6405 ntBASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RTN4IP1Q8WWV3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 GGT4P-201ENST00000623672 1708 ntBASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 AP002414.1-201ENST00000391405 1147 ntBASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 AC073648.2-201ENST00000510116 352 ntBASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 AC021087.4-201ENST00000563761 564 ntBASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 AC025062.2-201ENST00000605477 670 ntBASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 AL139424.1-201ENST00000607572 797 ntBASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 AC006449.6-201ENST00000612330 2296 ntBASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.9□□□□□ -0.18
RTN4IP1Q8WWV3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
RTN4IP1Q8WWV3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
RTN4IP1Q8WWV3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms