Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC107Q8WV48 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 AL596087.1-201ENST00000400979 1969 ntBASIC14.31□□□□□ -0.12
CCDC107Q8WV48 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC107Q8WV48 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 AL591684.3-201ENST00000605187 298 ntBASIC14.3□□□□□ -0.12
CCDC107Q8WV48 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 AP000867.4-201ENST00000641616 219 ntBASIC14.3□□□□□ -0.12
CCDC107Q8WV48 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 AC004817.3-201ENST00000602957 2129 ntBASIC14.3□□□□□ -0.12
CCDC107Q8WV48 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC107Q8WV48 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 AL603832.2-201ENST00000566195 2125 ntBASIC14.29□□□□□ -0.12
CCDC107Q8WV48 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CCDC107Q8WV48 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms