Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 AP001350.2-201ENST00000625104 1094 ntBASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 AC006449.5-201ENST00000610658 2098 ntBASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 GGT3P-204ENST00000453783 1664 ntBASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 LINC02228-204ENST00000642115 2962 ntBASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIMC1Q8NDZ2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 AL591424.1-201ENST00000442569 1213 ntBASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 KRT18P58-201ENST00000527480 1120 ntBASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 AC092865.5-201ENST00000545435 363 ntBASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 AC007064.4-201ENST00000637740 555 ntBASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 AL645728.2-201ENST00000641974 660 ntBASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIMC1Q8NDZ2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
SIMC1Q8NDZ2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms