Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PACS2Q86VP3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PACS2Q86VP3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PACS2Q86VP3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PACS2Q86VP3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.64■□□□□ 0.25
PACS2Q86VP3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.64■□□□□ 0.25
PACS2Q86VP3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PACS2Q86VP3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PACS2Q86VP3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PACS2Q86VP3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PACS2Q86VP3 CR383656.2-201ENST00000548656 2254 ntBASIC16.63■□□□□ 0.25
PACS2Q86VP3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PACS2Q86VP3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PACS2Q86VP3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PACS2Q86VP3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PACS2Q86VP3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PACS2Q86VP3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PACS2Q86VP3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.63■□□□□ 0.25
PACS2Q86VP3 AL109954.1-202ENST00000564051 2148 ntBASIC16.63■□□□□ 0.25
PACS2Q86VP3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PACS2Q86VP3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PACS2Q86VP3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PACS2Q86VP3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PACS2Q86VP3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.63■□□□□ 0.25
PACS2Q86VP3 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PACS2Q86VP3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.63■□□□□ 0.25
PACS2Q86VP3 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.63■□□□□ 0.25
PACS2Q86VP3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PACS2Q86VP3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PACS2Q86VP3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PACS2Q86VP3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.63■□□□□ 0.25
PACS2Q86VP3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.63■□□□□ 0.25
PACS2Q86VP3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PACS2Q86VP3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
PACS2Q86VP3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PACS2Q86VP3 AL390719.2-201ENST00000606993 987 ntBASIC16.63■□□□□ 0.25
PACS2Q86VP3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.63■□□□□ 0.25
PACS2Q86VP3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PACS2Q86VP3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PACS2Q86VP3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PACS2Q86VP3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.63■□□□□ 0.25
PACS2Q86VP3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PACS2Q86VP3 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PACS2Q86VP3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.63■□□□□ 0.25
PACS2Q86VP3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PACS2Q86VP3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PACS2Q86VP3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PACS2Q86VP3 AL024508.2-201ENST00000607749 1894 ntBASIC16.63■□□□□ 0.25
PACS2Q86VP3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.62■□□□□ 0.25
PACS2Q86VP3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PACS2Q86VP3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PACS2Q86VP3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PACS2Q86VP3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PACS2Q86VP3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PACS2Q86VP3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PACS2Q86VP3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PACS2Q86VP3 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.62■□□□□ 0.25
PACS2Q86VP3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PACS2Q86VP3 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC16.62■□□□□ 0.25
PACS2Q86VP3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PACS2Q86VP3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PACS2Q86VP3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PACS2Q86VP3 CHCHD2P8-201ENST00000429873 447 ntBASIC16.62■□□□□ 0.25
PACS2Q86VP3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PACS2Q86VP3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.62■□□□□ 0.25
PACS2Q86VP3 AC113404.2-201ENST00000507884 177 ntBASIC16.62■□□□□ 0.25
PACS2Q86VP3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.62■□□□□ 0.25
PACS2Q86VP3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
PACS2Q86VP3 AC090616.6-201ENST00000582640 721 ntBASIC16.62■□□□□ 0.25
PACS2Q86VP3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.62■□□□□ 0.25
PACS2Q86VP3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PACS2Q86VP3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.62■□□□□ 0.25
PACS2Q86VP3 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC16.62■□□□□ 0.25
PACS2Q86VP3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PACS2Q86VP3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.62■□□□□ 0.25
PACS2Q86VP3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
PACS2Q86VP3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PACS2Q86VP3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PACS2Q86VP3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PACS2Q86VP3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
PACS2Q86VP3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.62■□□□□ 0.25
PACS2Q86VP3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PACS2Q86VP3 AL353692.3-201ENST00000407031 1396 ntBASIC16.62■□□□□ 0.25
PACS2Q86VP3 AC016734.2-201ENST00000624325 1377 ntBASIC16.62■□□□□ 0.25
PACS2Q86VP3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PACS2Q86VP3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
PACS2Q86VP3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PACS2Q86VP3 AC232323.1-201ENST00000540724 2099 ntBASIC16.61■□□□□ 0.25
PACS2Q86VP3 REXO1L5P-201ENST00000622260 2098 ntBASIC16.61■□□□□ 0.25
PACS2Q86VP3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
PACS2Q86VP3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PACS2Q86VP3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PACS2Q86VP3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PACS2Q86VP3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PACS2Q86VP3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.61■□□□□ 0.25
PACS2Q86VP3 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PACS2Q86VP3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PACS2Q86VP3 LINC01101-201ENST00000622953 1884 ntBASIC16.61■□□□□ 0.25
PACS2Q86VP3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
PACS2Q86VP3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms