Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ALYREFQ86V81 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ALYREFQ86V81 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.27■□□□□ 0.35
ALYREFQ86V81 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
ALYREFQ86V81 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ALYREFQ86V81 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.27■□□□□ 0.35
ALYREFQ86V81 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALYREFQ86V81 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALYREFQ86V81 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.26■□□□□ 0.35
ALYREFQ86V81 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALYREFQ86V81 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALYREFQ86V81 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ALYREFQ86V81 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.26■□□□□ 0.35
ALYREFQ86V81 AC007541.1-201ENST00000570282 1469 ntBASIC17.26■□□□□ 0.35
ALYREFQ86V81 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALYREFQ86V81 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALYREFQ86V81 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALYREFQ86V81 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALYREFQ86V81 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.26■□□□□ 0.35
ALYREFQ86V81 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.26■□□□□ 0.35
ALYREFQ86V81 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
ALYREFQ86V81 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.26■□□□□ 0.35
ALYREFQ86V81 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.26■□□□□ 0.35
ALYREFQ86V81 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.26■□□□□ 0.35
ALYREFQ86V81 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.26■□□□□ 0.35
ALYREFQ86V81 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALYREFQ86V81 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ALYREFQ86V81 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALYREFQ86V81 RHOQP1-201ENST00000555758 579 ntBASIC17.26■□□□□ 0.35
ALYREFQ86V81 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.26■□□□□ 0.35
ALYREFQ86V81 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.26■□□□□ 0.35
ALYREFQ86V81 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ALYREFQ86V81 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.26■□□□□ 0.35
ALYREFQ86V81 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.26■□□□□ 0.35
ALYREFQ86V81 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
ALYREFQ86V81 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.26■□□□□ 0.35
ALYREFQ86V81 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALYREFQ86V81 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALYREFQ86V81 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.26■□□□□ 0.35
ALYREFQ86V81 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.26■□□□□ 0.35
ALYREFQ86V81 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALYREFQ86V81 LYSMD4-203ENST00000378904 2122 ntBASIC17.26■□□□□ 0.35
ALYREFQ86V81 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.26■□□□□ 0.35
ALYREFQ86V81 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ALYREFQ86V81 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ALYREFQ86V81 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALYREFQ86V81 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ALYREFQ86V81 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ALYREFQ86V81 AC092171.3-201ENST00000610122 2651 ntBASIC17.25■□□□□ 0.35
ALYREFQ86V81 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALYREFQ86V81 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.25■□□□□ 0.35
ALYREFQ86V81 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.25■□□□□ 0.35
ALYREFQ86V81 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
ALYREFQ86V81 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.25■□□□□ 0.35
ALYREFQ86V81 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
ALYREFQ86V81 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALYREFQ86V81 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALYREFQ86V81 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALYREFQ86V81 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALYREFQ86V81 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALYREFQ86V81 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.25■□□□□ 0.35
ALYREFQ86V81 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.25■□□□□ 0.35
ALYREFQ86V81 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.25■□□□□ 0.35
ALYREFQ86V81 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALYREFQ86V81 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALYREFQ86V81 AL391005.1-201ENST00000623953 2435 ntBASIC17.25■□□□□ 0.35
ALYREFQ86V81 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALYREFQ86V81 CROCCP1-201ENST00000426910 5675 ntBASIC17.25■□□□□ 0.35
ALYREFQ86V81 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALYREFQ86V81 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.25■□□□□ 0.35
ALYREFQ86V81 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
ALYREFQ86V81 AP006294.1-201ENST00000415407 339 ntBASIC17.25■□□□□ 0.35
ALYREFQ86V81 AL020989.1-201ENST00000422979 469 ntBASIC17.25■□□□□ 0.35
ALYREFQ86V81 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.25■□□□□ 0.35
ALYREFQ86V81 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.25■□□□□ 0.35
ALYREFQ86V81 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.25■□□□□ 0.35
ALYREFQ86V81 KRT223P-202ENST00000449164 1292 ntBASIC17.25■□□□□ 0.35
ALYREFQ86V81 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALYREFQ86V81 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.25■□□□□ 0.35
ALYREFQ86V81 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.25■□□□□ 0.35
ALYREFQ86V81 AC104794.3-201ENST00000566840 1248 ntBASIC17.25■□□□□ 0.35
ALYREFQ86V81 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.25■□□□□ 0.35
ALYREFQ86V81 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALYREFQ86V81 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.25■□□□□ 0.35
ALYREFQ86V81 AC133552.6-201ENST00000613406 534 ntBASIC17.25■□□□□ 0.35
ALYREFQ86V81 MIR6869-201ENST00000619434 62 ntBASIC17.25■□□□□ 0.35
ALYREFQ86V81 SNX1-214ENST00000625244 324 ntTSL 5 BASIC17.25■□□□□ 0.35
ALYREFQ86V81 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALYREFQ86V81 AC046185.3-201ENST00000623228 1824 ntBASIC17.25■□□□□ 0.35
ALYREFQ86V81 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALYREFQ86V81 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALYREFQ86V81 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALYREFQ86V81 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.25■□□□□ 0.35
ALYREFQ86V81 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALYREFQ86V81 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALYREFQ86V81 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALYREFQ86V81 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALYREFQ86V81 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALYREFQ86V81 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALYREFQ86V81 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms