Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
AP1S1P61966 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.52■□□□□ 0.23
AP1S1P61966 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP1S1P61966 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.52■□□□□ 0.23
AP1S1P61966 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
AP1S1P61966 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S1P61966 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.51■□□□□ 0.23
AP1S1P61966 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
AP1S1P61966 KRT18P28-201ENST00000453838 1332 ntBASIC16.51■□□□□ 0.23
AP1S1P61966 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S1P61966 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.51■□□□□ 0.23
AP1S1P61966 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S1P61966 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.51■□□□□ 0.23
AP1S1P61966 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
AP1S1P61966 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S1P61966 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
AP1S1P61966 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S1P61966 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
AP1S1P61966 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S1P61966 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
AP1S1P61966 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.51■□□□□ 0.23
AP1S1P61966 SPDYE14P-201ENST00000442619 822 ntBASIC16.51■□□□□ 0.23
AP1S1P61966 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S1P61966 AC092183.1-201ENST00000469884 875 ntBASIC16.51■□□□□ 0.23
AP1S1P61966 AL512356.2-201ENST00000546955 174 ntBASIC16.51■□□□□ 0.23
AP1S1P61966 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.51■□□□□ 0.23
AP1S1P61966 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.51■□□□□ 0.23
AP1S1P61966 LINC00628-201ENST00000628516 1289 ntBASIC16.51■□□□□ 0.23
AP1S1P61966 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
AP1S1P61966 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
AP1S1P61966 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S1P61966 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.51■□□□□ 0.23
AP1S1P61966 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S1P61966 AP3S2-216ENST00000617003 1561 ntBASIC16.51■□□□□ 0.23
AP1S1P61966 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S1P61966 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP1S1P61966 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.51■□□□□ 0.23
AP1S1P61966 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
AP1S1P61966 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S1P61966 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.5■□□□□ 0.23
AP1S1P61966 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S1P61966 REXO1L8P-201ENST00000604378 1897 ntBASIC16.5■□□□□ 0.23
AP1S1P61966 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S1P61966 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
AP1S1P61966 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S1P61966 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S1P61966 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
AP1S1P61966 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
AP1S1P61966 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S1P61966 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S1P61966 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S1P61966 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S1P61966 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
AP1S1P61966 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
AP1S1P61966 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
AP1S1P61966 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S1P61966 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S1P61966 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S1P61966 AL139400.1-201ENST00000366220 510 ntBASIC16.5■□□□□ 0.23
AP1S1P61966 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.5■□□□□ 0.23
AP1S1P61966 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.5■□□□□ 0.23
AP1S1P61966 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.5■□□□□ 0.23
AP1S1P61966 RNA5SP410-201ENST00000516285 106 ntBASIC16.5■□□□□ 0.23
AP1S1P61966 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.5■□□□□ 0.23
AP1S1P61966 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
AP1S1P61966 AC026150.2-201ENST00000564693 1156 ntBASIC16.5■□□□□ 0.23
AP1S1P61966 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S1P61966 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S1P61966 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.5■□□□□ 0.23
AP1S1P61966 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S1P61966 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.5■□□□□ 0.23
AP1S1P61966 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.5■□□□□ 0.23
AP1S1P61966 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
AP1S1P61966 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S1P61966 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.5■□□□□ 0.23
AP1S1P61966 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.5■□□□□ 0.23
AP1S1P61966 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S1P61966 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S1P61966 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.5■□□□□ 0.23
AP1S1P61966 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S1P61966 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP1S1P61966 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.49■□□□□ 0.23
AP1S1P61966 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S1P61966 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.49■□□□□ 0.23
AP1S1P61966 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.49■□□□□ 0.23
AP1S1P61966 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S1P61966 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S1P61966 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.49■□□□□ 0.23
AP1S1P61966 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S1P61966 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S1P61966 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S1P61966 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
AP1S1P61966 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
AP1S1P61966 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S1P61966 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
AP1S1P61966 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
AP1S1P61966 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
AP1S1P61966 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.49■□□□□ 0.23
AP1S1P61966 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.49■□□□□ 0.23
AP1S1P61966 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms