Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 PCDHA1-201ENST00000378133 2726 ntBASIC16.33■□□□□ 0.2
ZNF140P52738 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.33■□□□□ 0.2
ZNF140P52738 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.33■□□□□ 0.2
ZNF140P52738 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF140P52738 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
ZNF140P52738 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF140P52738 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF140P52738 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.33■□□□□ 0.2
ZNF140P52738 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF140P52738 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF140P52738 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF140P52738 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF140P52738 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF140P52738 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF140P52738 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF140P52738 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ZNF140P52738 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF140P52738 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ZNF140P52738 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ZNF140P52738 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF140P52738 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF140P52738 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF140P52738 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF140P52738 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF140P52738 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ZNF140P52738 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF140P52738 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF140P52738 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF140P52738 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF140P52738 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ZNF140P52738 RPSAP43-201ENST00000402237 625 ntBASIC16.32■□□□□ 0.2
ZNF140P52738 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
ZNF140P52738 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF140P52738 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.32■□□□□ 0.2
ZNF140P52738 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF140P52738 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.32■□□□□ 0.2
ZNF140P52738 CEND1P1-201ENST00000451006 455 ntBASIC16.32■□□□□ 0.2
ZNF140P52738 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.32■□□□□ 0.2
ZNF140P52738 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.32■□□□□ 0.2
ZNF140P52738 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ZNF140P52738 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF140P52738 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF140P52738 MIR4469-201ENST00000583919 79 ntBASIC16.32■□□□□ 0.2
ZNF140P52738 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF140P52738 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
ZNF140P52738 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF140P52738 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.32■□□□□ 0.2
ZNF140P52738 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
ZNF140P52738 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF140P52738 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF140P52738 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF140P52738 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
ZNF140P52738 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF140P52738 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF140P52738 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF140P52738 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF140P52738 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF140P52738 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF140P52738 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF140P52738 AC024909.3-201ENST00000611513 2257 ntBASIC16.31■□□□□ 0.2
ZNF140P52738 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF140P52738 AL603832.2-201ENST00000566195 2125 ntBASIC16.31■□□□□ 0.2
ZNF140P52738 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF140P52738 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ZNF140P52738 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ZNF140P52738 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF140P52738 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF140P52738 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF140P52738 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF140P52738 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF140P52738 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ZNF140P52738 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF140P52738 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF140P52738 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF140P52738 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ZNF140P52738 MIR346-201ENST00000362234 95 ntBASIC16.31■□□□□ 0.2
ZNF140P52738 MIR648-201ENST00000385046 94 ntBASIC16.31■□□□□ 0.2
ZNF140P52738 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.31■□□□□ 0.2
ZNF140P52738 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.31■□□□□ 0.2
ZNF140P52738 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
ZNF140P52738 UPF3AP3-201ENST00000420996 769 ntBASIC16.31■□□□□ 0.2
ZNF140P52738 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.31■□□□□ 0.2
ZNF140P52738 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF140P52738 AC098859.1-201ENST00000502915 1238 ntBASIC16.31■□□□□ 0.2
ZNF140P52738 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF140P52738 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.31■□□□□ 0.2
ZNF140P52738 AP000842.3-202ENST00000569238 1080 ntBASIC16.31■□□□□ 0.2
ZNF140P52738 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF140P52738 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF140P52738 AC022145.2-201ENST00000598203 171 ntBASIC16.31■□□□□ 0.2
ZNF140P52738 AL365330.1-201ENST00000607459 531 ntBASIC16.31■□□□□ 0.2
ZNF140P52738 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF140P52738 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
ZNF140P52738 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF140P52738 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
ZNF140P52738 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF140P52738 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF140P52738 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF140P52738 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ZNF140P52738 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms