Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.28□□□□□ -0.28
RAB5CP51148 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB5CP51148 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB5CP51148 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.28□□□□□ -0.28
RAB5CP51148 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
RAB5CP51148 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RAB5CP51148 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.28□□□□□ -0.28
RAB5CP51148 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5CP51148 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RAB5CP51148 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RAB5CP51148 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RAB5CP51148 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.27□□□□□ -0.28
RAB5CP51148 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RAB5CP51148 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
RAB5CP51148 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
RAB5CP51148 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
RAB5CP51148 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
RAB5CP51148 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.27□□□□□ -0.28
RAB5CP51148 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.27□□□□□ -0.28
RAB5CP51148 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RAB5CP51148 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RAB5CP51148 LINC00528-201ENST00000600723 2160 ntBASIC13.27□□□□□ -0.28
RAB5CP51148 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5CP51148 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5CP51148 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.27□□□□□ -0.29
RAB5CP51148 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.27□□□□□ -0.29
RAB5CP51148 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC13.27□□□□□ -0.29
RAB5CP51148 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
RAB5CP51148 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.27□□□□□ -0.29
RAB5CP51148 AC005332.3-201ENST00000589904 676 ntBASIC13.27□□□□□ -0.29
RAB5CP51148 CD177P1-201ENST00000606252 935 ntBASIC13.27□□□□□ -0.29
RAB5CP51148 AL157888.1-201ENST00000631930 593 ntBASIC13.27□□□□□ -0.29
RAB5CP51148 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5CP51148 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5CP51148 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.27□□□□□ -0.29
RAB5CP51148 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.27□□□□□ -0.29
RAB5CP51148 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC13.27□□□□□ -0.29
RAB5CP51148 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5CP51148 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
RAB5CP51148 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
RAB5CP51148 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.27□□□□□ -0.29
RAB5CP51148 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
RAB5CP51148 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5CP51148 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5CP51148 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5CP51148 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.27□□□□□ -0.29
RAB5CP51148 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5CP51148 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.27□□□□□ -0.29
RAB5CP51148 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5CP51148 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5CP51148 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5CP51148 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5CP51148 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.27□□□□□ -0.29
RAB5CP51148 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
RAB5CP51148 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
RAB5CP51148 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5CP51148 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
RAB5CP51148 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RAB5CP51148 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.27□□□□□ -0.29
RAB5CP51148 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5CP51148 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.26□□□□□ -0.29
RAB5CP51148 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
RAB5CP51148 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
RAB5CP51148 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5CP51148 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5CP51148 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
RAB5CP51148 AC106881.1-201ENST00000605849 3329 ntBASIC13.26□□□□□ -0.29
RAB5CP51148 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5CP51148 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5CP51148 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5CP51148 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5CP51148 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5CP51148 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5CP51148 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5CP51148 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5CP51148 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RAB5CP51148 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB5CP51148 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5CP51148 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5CP51148 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5CP51148 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB5CP51148 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB5CP51148 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5CP51148 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RAB5CP51148 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RAB5CP51148 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC13.26□□□□□ -0.29
RAB5CP51148 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5CP51148 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.26□□□□□ -0.29
RAB5CP51148 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5CP51148 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.26□□□□□ -0.29
RAB5CP51148 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RAB5CP51148 AC122714.2-201ENST00000502787 707 ntBASIC13.26□□□□□ -0.29
RAB5CP51148 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms