Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CR1P49238 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.51□□□□□ -0.09
CX3CR1P49238 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CX3CR1P49238 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CR1P49238 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CR1P49238 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.51□□□□□ -0.09
CX3CR1P49238 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CX3CR1P49238 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CR1P49238 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CR1P49238 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.5□□□□□ -0.09
CX3CR1P49238 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.5□□□□□ -0.09
CX3CR1P49238 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.5□□□□□ -0.09
CX3CR1P49238 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CR1P49238 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.5□□□□□ -0.09
CX3CR1P49238 LINC01144-201ENST00000626198 1710 ntBASIC14.5□□□□□ -0.09
CX3CR1P49238 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CX3CR1P49238 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.5□□□□□ -0.09
CX3CR1P49238 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CR1P49238 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
CX3CR1P49238 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CR1P49238 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.5□□□□□ -0.09
CX3CR1P49238 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CR1P49238 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.5□□□□□ -0.09
CX3CR1P49238 AL450487.1-201ENST00000426799 995 ntBASIC14.5□□□□□ -0.09
CX3CR1P49238 FAAHP1-202ENST00000446499 1238 ntBASIC14.5□□□□□ -0.09
CX3CR1P49238 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.5□□□□□ -0.09
CX3CR1P49238 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.5□□□□□ -0.09
CX3CR1P49238 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.5□□□□□ -0.09
CX3CR1P49238 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.5□□□□□ -0.09
CX3CR1P49238 AL773604.1-201ENST00000617417 272 ntBASIC14.5□□□□□ -0.09
CX3CR1P49238 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CX3CR1P49238 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CR1P49238 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.5□□□□□ -0.09
CX3CR1P49238 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CR1P49238 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.5□□□□□ -0.09
CX3CR1P49238 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.5□□□□□ -0.09
CX3CR1P49238 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CR1P49238 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CR1P49238 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.5□□□□□ -0.09
CX3CR1P49238 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.5□□□□□ -0.09
CX3CR1P49238 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CX3CR1P49238 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CR1P49238 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CR1P49238 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CX3CR1P49238 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CR1P49238 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CX3CR1P49238 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CR1P49238 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.49□□□□□ -0.09
CX3CR1P49238 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.49□□□□□ -0.09
CX3CR1P49238 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CR1P49238 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CR1P49238 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.49□□□□□ -0.09
CX3CR1P49238 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CR1P49238 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CR1P49238 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CR1P49238 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CR1P49238 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CR1P49238 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CR1P49238 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
CX3CR1P49238 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.49□□□□□ -0.09
CX3CR1P49238 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CR1P49238 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CR1P49238 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CR1P49238 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.49□□□□□ -0.09
CX3CR1P49238 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.49□□□□□ -0.09
CX3CR1P49238 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.49□□□□□ -0.09
CX3CR1P49238 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CR1P49238 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.49□□□□□ -0.09
CX3CR1P49238 POU5F1P6-201ENST00000466990 990 ntBASIC14.49□□□□□ -0.09
CX3CR1P49238 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CX3CR1P49238 AC108751.1-201ENST00000490852 363 ntBASIC14.49□□□□□ -0.09
CX3CR1P49238 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.49□□□□□ -0.09
CX3CR1P49238 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.49□□□□□ -0.09
CX3CR1P49238 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.49□□□□□ -0.09
CX3CR1P49238 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.49□□□□□ -0.09
CX3CR1P49238 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.49□□□□□ -0.09
CX3CR1P49238 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.49□□□□□ -0.09
CX3CR1P49238 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.49□□□□□ -0.09
CX3CR1P49238 OR7E47P-204ENST00000575924 449 ntBASIC14.49□□□□□ -0.09
CX3CR1P49238 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
CX3CR1P49238 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.49□□□□□ -0.09
CX3CR1P49238 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.49□□□□□ -0.09
CX3CR1P49238 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.49□□□□□ -0.09
CX3CR1P49238 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CX3CR1P49238 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.49□□□□□ -0.09
CX3CR1P49238 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.49□□□□□ -0.09
CX3CR1P49238 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.49□□□□□ -0.09
CX3CR1P49238 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CR1P49238 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.49□□□□□ -0.09
CX3CR1P49238 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CR1P49238 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CX3CR1P49238 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CX3CR1P49238 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CR1P49238 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CR1P49238 AC006449.6-201ENST00000612330 2296 ntBASIC14.49□□□□□ -0.09
CX3CR1P49238 AL596087.1-201ENST00000400979 1969 ntBASIC14.49□□□□□ -0.09
CX3CR1P49238 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CR1P49238 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CR1P49238 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CR1P49238 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms