Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT20P35900 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.72■□□□□ 0.11
KRT20P35900 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT20P35900 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
KRT20P35900 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT20P35900 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.71■□□□□ 0.11
KRT20P35900 HLA-A-202ENST00000376806 1854 ntBASIC15.71■□□□□ 0.11
KRT20P35900 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT20P35900 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT20P35900 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT20P35900 C8orf49-201ENST00000525043 1968 ntBASIC15.71■□□□□ 0.11
KRT20P35900 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRT20P35900 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRT20P35900 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
KRT20P35900 MIR600HG-201ENST00000449175 5984 ntBASIC15.71■□□□□ 0.11
KRT20P35900 AL365203.3-201ENST00000609742 2057 ntBASIC15.71■□□□□ 0.11
KRT20P35900 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.71■□□□□ 0.11
KRT20P35900 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
KRT20P35900 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRT20P35900 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT20P35900 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT20P35900 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT20P35900 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRT20P35900 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.71■□□□□ 0.11
KRT20P35900 PAWRP1-201ENST00000451083 565 ntBASIC15.71■□□□□ 0.11
KRT20P35900 AC087163.2-201ENST00000457299 853 ntBASIC15.71■□□□□ 0.11
KRT20P35900 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT20P35900 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.71■□□□□ 0.11
KRT20P35900 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT20P35900 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.71■□□□□ 0.11
KRT20P35900 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT20P35900 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT20P35900 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT20P35900 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT20P35900 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT20P35900 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRT20P35900 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.71■□□□□ 0.11
KRT20P35900 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT20P35900 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT20P35900 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT20P35900 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.71■□□□□ 0.11
KRT20P35900 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
KRT20P35900 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT20P35900 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT20P35900 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT20P35900 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KRT20P35900 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KRT20P35900 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KRT20P35900 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
KRT20P35900 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
KRT20P35900 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
KRT20P35900 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
KRT20P35900 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
KRT20P35900 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT20P35900 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
KRT20P35900 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT20P35900 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
KRT20P35900 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.7■□□□□ 0.1
KRT20P35900 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
KRT20P35900 AL590627.1-203ENST00000421194 1026 ntBASIC15.7■□□□□ 0.1
KRT20P35900 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
KRT20P35900 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.7■□□□□ 0.1
KRT20P35900 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.7■□□□□ 0.1
KRT20P35900 AC108073.2-201ENST00000464002 357 ntBASIC15.7■□□□□ 0.1
KRT20P35900 RNA5SP419-201ENST00000515908 135 ntBASIC15.7■□□□□ 0.1
KRT20P35900 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
KRT20P35900 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.7■□□□□ 0.1
KRT20P35900 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
KRT20P35900 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT20P35900 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT20P35900 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT20P35900 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.7■□□□□ 0.1
KRT20P35900 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms