Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.27■□□□□ 0.04
LCN1P31025 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.27■□□□□ 0.04
LCN1P31025 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P31025 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P31025 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P31025 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.27■□□□□ 0.04
LCN1P31025 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P31025 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P31025 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P31025 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LCN1P31025 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P31025 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P31025 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P31025 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.27■□□□□ 0.04
LCN1P31025 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P31025 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P31025 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P31025 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P31025 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P31025 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P31025 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.27■□□□□ 0.04
LCN1P31025 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P31025 AL022342.1-201ENST00000400363 863 ntBASIC15.27■□□□□ 0.04
LCN1P31025 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.27■□□□□ 0.04
LCN1P31025 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.27■□□□□ 0.04
LCN1P31025 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.27■□□□□ 0.04
LCN1P31025 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.27■□□□□ 0.04
LCN1P31025 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.27■□□□□ 0.04
LCN1P31025 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
LCN1P31025 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.27■□□□□ 0.04
LCN1P31025 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P31025 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P31025 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
LCN1P31025 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LCN1P31025 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.27■□□□□ 0.04
LCN1P31025 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LCN1P31025 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LCN1P31025 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LCN1P31025 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LCN1P31025 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LCN1P31025 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LCN1P31025 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.27■□□□□ 0.03
LCN1P31025 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LCN1P31025 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LCN1P31025 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LCN1P31025 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.26■□□□□ 0.03
LCN1P31025 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCN1P31025 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCN1P31025 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.26■□□□□ 0.03
LCN1P31025 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.26■□□□□ 0.03
LCN1P31025 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.26■□□□□ 0.03
LCN1P31025 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
LCN1P31025 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.26■□□□□ 0.03
LCN1P31025 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LCN1P31025 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LCN1P31025 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCN1P31025 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCN1P31025 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCN1P31025 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
LCN1P31025 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LCN1P31025 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.26■□□□□ 0.03
LCN1P31025 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.26■□□□□ 0.03
LCN1P31025 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.26■□□□□ 0.03
LCN1P31025 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
LCN1P31025 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LCN1P31025 AC112191.1-201ENST00000523689 701 ntBASIC15.26■□□□□ 0.03
LCN1P31025 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.26■□□□□ 0.03
LCN1P31025 AC018845.2-201ENST00000568326 409 ntBASIC15.26■□□□□ 0.03
LCN1P31025 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.26■□□□□ 0.03
LCN1P31025 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.26■□□□□ 0.03
LCN1P31025 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LCN1P31025 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LCN1P31025 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.26■□□□□ 0.03
LCN1P31025 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LCN1P31025 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LCN1P31025 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCN1P31025 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCN1P31025 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LCN1P31025 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCN1P31025 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCN1P31025 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
LCN1P31025 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LCN1P31025 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.26■□□□□ 0.03
LCN1P31025 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCN1P31025 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.26■□□□□ 0.03
LCN1P31025 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LCN1P31025 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
LCN1P31025 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LCN1P31025 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.25■□□□□ 0.03
LCN1P31025 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.25■□□□□ 0.03
LCN1P31025 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P31025 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P31025 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P31025 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P31025 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
LCN1P31025 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P31025 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LCN1P31025 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P31025 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCN1P31025 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms