Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.49□□□□□ -0.09
ATF1P18846 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATF1P18846 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATF1P18846 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATF1P18846 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ATF1P18846 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ATF1P18846 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATF1P18846 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ATF1P18846 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ATF1P18846 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATF1P18846 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATF1P18846 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ATF1P18846 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
ATF1P18846 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ATF1P18846 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ATF1P18846 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.49□□□□□ -0.09
ATF1P18846 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.49□□□□□ -0.09
ATF1P18846 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATF1P18846 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
ATF1P18846 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATF1P18846 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATF1P18846 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATF1P18846 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATF1P18846 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATF1P18846 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.48□□□□□ -0.09
ATF1P18846 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ATF1P18846 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
ATF1P18846 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATF1P18846 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
ATF1P18846 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATF1P18846 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATF1P18846 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATF1P18846 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATF1P18846 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATF1P18846 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATF1P18846 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.48□□□□□ -0.09
ATF1P18846 PAWRP1-201ENST00000451083 565 ntBASIC14.48□□□□□ -0.09
ATF1P18846 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.48□□□□□ -0.09
ATF1P18846 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.48□□□□□ -0.09
ATF1P18846 AC139887.3-201ENST00000568585 713 ntBASIC14.48□□□□□ -0.09
ATF1P18846 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.48□□□□□ -0.09
ATF1P18846 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.48□□□□□ -0.09
ATF1P18846 AL445228.2-201ENST00000605589 952 ntBASIC14.48□□□□□ -0.09
ATF1P18846 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.48□□□□□ -0.09
ATF1P18846 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.48□□□□□ -0.09
ATF1P18846 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATF1P18846 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
ATF1P18846 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATF1P18846 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.48□□□□□ -0.09
ATF1P18846 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATF1P18846 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
ATF1P18846 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATF1P18846 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATF1P18846 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.48□□□□□ -0.09
ATF1P18846 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ATF1P18846 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATF1P18846 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
ATF1P18846 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATF1P18846 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ATF1P18846 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
ATF1P18846 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.47□□□□□ -0.09
ATF1P18846 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
ATF1P18846 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.47□□□□□ -0.09
ATF1P18846 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATF1P18846 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.47□□□□□ -0.09
ATF1P18846 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.47□□□□□ -0.09
ATF1P18846 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.47□□□□□ -0.09
ATF1P18846 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATF1P18846 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATF1P18846 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATF1P18846 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.47□□□□□ -0.09
ATF1P18846 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATF1P18846 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
ATF1P18846 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATF1P18846 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
ATF1P18846 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
ATF1P18846 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
ATF1P18846 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATF1P18846 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.47□□□□□ -0.09
ATF1P18846 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.47□□□□□ -0.09
ATF1P18846 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ATF1P18846 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.47□□□□□ -0.09
ATF1P18846 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.47□□□□□ -0.09
ATF1P18846 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.47□□□□□ -0.09
ATF1P18846 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
ATF1P18846 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
ATF1P18846 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.47□□□□□ -0.09
ATF1P18846 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.47□□□□□ -0.09
ATF1P18846 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.47□□□□□ -0.09
ATF1P18846 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.47□□□□□ -0.09
ATF1P18846 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
ATF1P18846 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.47□□□□□ -0.09
ATF1P18846 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.47□□□□□ -0.09
ATF1P18846 AL355877.3-201ENST00000622820 899 ntBASIC14.47□□□□□ -0.09
ATF1P18846 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ATF1P18846 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.47□□□□□ -0.09
ATF1P18846 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
ATF1P18846 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.47□□□□□ -0.09
ATF1P18846 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
ATF1P18846 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms