Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
H2AFXP16104 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
H2AFXP16104 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
H2AFXP16104 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
H2AFXP16104 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC17.08■□□□□ 0.33
H2AFXP16104 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
H2AFXP16104 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC17.08■□□□□ 0.33
H2AFXP16104 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
H2AFXP16104 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.08■□□□□ 0.33
H2AFXP16104 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.08■□□□□ 0.33
H2AFXP16104 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
H2AFXP16104 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
H2AFXP16104 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.08■□□□□ 0.33
H2AFXP16104 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
H2AFXP16104 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2AFXP16104 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.08■□□□□ 0.32
H2AFXP16104 TOP3BP1-201ENST00000420768 1380 ntBASIC17.08■□□□□ 0.32
H2AFXP16104 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2AFXP16104 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
H2AFXP16104 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
H2AFXP16104 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
H2AFXP16104 EGLN1P1-201ENST00000531623 762 ntBASIC17.08■□□□□ 0.32
H2AFXP16104 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
H2AFXP16104 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
H2AFXP16104 TERC-201ENST00000602385 541 ntBASIC17.08■□□□□ 0.32
H2AFXP16104 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2AFXP16104 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.08■□□□□ 0.32
H2AFXP16104 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2AFXP16104 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2AFXP16104 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
H2AFXP16104 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2AFXP16104 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.08■□□□□ 0.32
H2AFXP16104 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2AFXP16104 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.08■□□□□ 0.32
H2AFXP16104 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
H2AFXP16104 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
H2AFXP16104 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2AFXP16104 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
H2AFXP16104 AL359183.1-201ENST00000623796 2132 ntBASIC17.08■□□□□ 0.32
H2AFXP16104 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2AFXP16104 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.07■□□□□ 0.32
H2AFXP16104 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2AFXP16104 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
H2AFXP16104 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.07■□□□□ 0.32
H2AFXP16104 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2AFXP16104 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.07■□□□□ 0.32
H2AFXP16104 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.07■□□□□ 0.32
H2AFXP16104 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC17.07■□□□□ 0.32
H2AFXP16104 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2AFXP16104 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.07■□□□□ 0.32
H2AFXP16104 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
H2AFXP16104 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2AFXP16104 AC243591.1-201ENST00000452967 1364 ntBASIC17.07■□□□□ 0.32
H2AFXP16104 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2AFXP16104 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2AFXP16104 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2AFXP16104 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2AFXP16104 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.07■□□□□ 0.32
H2AFXP16104 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.07■□□□□ 0.32
H2AFXP16104 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.07■□□□□ 0.32
H2AFXP16104 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.07■□□□□ 0.32
H2AFXP16104 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
H2AFXP16104 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.07■□□□□ 0.32
H2AFXP16104 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2AFXP16104 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2AFXP16104 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
H2AFXP16104 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
H2AFXP16104 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
H2AFXP16104 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2AFXP16104 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2AFXP16104 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2AFXP16104 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.07■□□□□ 0.32
H2AFXP16104 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.07■□□□□ 0.32
H2AFXP16104 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
H2AFXP16104 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
H2AFXP16104 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2AFXP16104 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2AFXP16104 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2AFXP16104 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2AFXP16104 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
H2AFXP16104 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2AFXP16104 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2AFXP16104 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
H2AFXP16104 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.06■□□□□ 0.32
H2AFXP16104 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
H2AFXP16104 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2AFXP16104 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.06■□□□□ 0.32
H2AFXP16104 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
H2AFXP16104 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2AFXP16104 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2AFXP16104 KRT8P44-201ENST00000441609 1350 ntBASIC17.06■□□□□ 0.32
H2AFXP16104 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.06■□□□□ 0.32
H2AFXP16104 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
H2AFXP16104 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
H2AFXP16104 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2AFXP16104 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2AFXP16104 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
H2AFXP16104 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
H2AFXP16104 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
H2AFXP16104 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms