Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 AC009078.2-202ENST00000463353 338 ntBASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 AC093909.1-201ENST00000504731 1122 ntBASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 AP001005.1-201ENST00000571755 1248 ntBASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 AC010654.1-201ENST00000615722 808 ntBASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 AL513523.2-202ENST00000427283 2040 ntBASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.72□□□□□ -0.21
IGHV3-43DP0DP04 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 UNC93B6-202ENST00000528242 690 ntBASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 ACTL9-202ENST00000612068 1252 ntBASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.71□□□□□ -0.21
IGHV3-43DP0DP04 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
IGHV3-43DP0DP04 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
IGHV3-43DP0DP04 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
IGHV3-43DP0DP04 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
IGHV3-43DP0DP04 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.71□□□□□ -0.22
IGHV3-43DP0DP04 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
IGHV3-43DP0DP04 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.71□□□□□ -0.22
IGHV3-43DP0DP04 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
IGHV3-43DP0DP04 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
IGHV3-43DP0DP04 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.71□□□□□ -0.22
IGHV3-43DP0DP04 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
IGHV3-43DP0DP04 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.71□□□□□ -0.22
IGHV3-43DP0DP04 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV3-43DP0DP04 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
IGHV3-43DP0DP04 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV3-43DP0DP04 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
IGHV3-43DP0DP04 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV3-43DP0DP04 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
IGHV3-43DP0DP04 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
IGHV3-43DP0DP04 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.7□□□□□ -0.22
IGHV3-43DP0DP04 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms