Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTSDP07339 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTSDP07339 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTSDP07339 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.7□□□□□ -0.22
CTSDP07339 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
CTSDP07339 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTSDP07339 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
CTSDP07339 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.7□□□□□ -0.22
CTSDP07339 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.7□□□□□ -0.22
CTSDP07339 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTSDP07339 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CTSDP07339 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.7□□□□□ -0.22
CTSDP07339 MIR1224-201ENST00000408193 85 ntBASIC13.7□□□□□ -0.22
CTSDP07339 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.7□□□□□ -0.22
CTSDP07339 BX276092.5-203ENST00000456199 560 ntBASIC13.7□□□□□ -0.22
CTSDP07339 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.7□□□□□ -0.22
CTSDP07339 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.7□□□□□ -0.22
CTSDP07339 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CTSDP07339 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.7□□□□□ -0.22
CTSDP07339 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.7□□□□□ -0.22
CTSDP07339 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CTSDP07339 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
CTSDP07339 AC114341.1-201ENST00000618070 349 ntBASIC13.7□□□□□ -0.22
CTSDP07339 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTSDP07339 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTSDP07339 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CTSDP07339 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTSDP07339 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.7□□□□□ -0.22
CTSDP07339 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CTSDP07339 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTSDP07339 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTSDP07339 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTSDP07339 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CTSDP07339 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CTSDP07339 AL136379.1-201ENST00000623471 2642 ntBASIC13.7□□□□□ -0.22
CTSDP07339 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CTSDP07339 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.7□□□□□ -0.22
CTSDP07339 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CTSDP07339 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CTSDP07339 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.69□□□□□ -0.22
CTSDP07339 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.69□□□□□ -0.22
CTSDP07339 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CTSDP07339 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.69□□□□□ -0.22
CTSDP07339 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CTSDP07339 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CTSDP07339 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CTSDP07339 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.69□□□□□ -0.22
CTSDP07339 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CTSDP07339 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CTSDP07339 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CTSDP07339 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CTSDP07339 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CTSDP07339 ABCD1P5-201ENST00000445663 754 ntBASIC13.69□□□□□ -0.22
CTSDP07339 PAWRP1-201ENST00000451083 565 ntBASIC13.69□□□□□ -0.22
CTSDP07339 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.69□□□□□ -0.22
CTSDP07339 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.69□□□□□ -0.22
CTSDP07339 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.69□□□□□ -0.22
CTSDP07339 CYP2A7P1-201ENST00000595391 815 ntBASIC13.69□□□□□ -0.22
CTSDP07339 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.69□□□□□ -0.22
CTSDP07339 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CTSDP07339 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CTSDP07339 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
CTSDP07339 NCF1C-201ENST00000438382 1427 ntBASIC13.69□□□□□ -0.22
CTSDP07339 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.69□□□□□ -0.22
CTSDP07339 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CTSDP07339 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CTSDP07339 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 SSR4P1-203ENST00000599569 2260 ntBASIC13.69□□□□□ -0.22
CTSDP07339 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CTSDP07339 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSDP07339 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.68□□□□□ -0.22
CTSDP07339 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.68□□□□□ -0.22
CTSDP07339 AC092919.2-201ENST00000623631 1645 ntBASIC13.68□□□□□ -0.22
CTSDP07339 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTSDP07339 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTSDP07339 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms