Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PRKN-211ENST00000615065 261 ntTSL 5 BASIC10.04□□□□□ -0.8
APOBP04114 AL139011.1-202ENST00000642063 584 ntBASIC10.04□□□□□ -0.8
APOBP04114 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
APOBP04114 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOBP04114 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC10.03□□□□□ -0.8
APOBP04114 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
APOBP04114 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOBP04114 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC10.03□□□□□ -0.8
APOBP04114 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
APOBP04114 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOBP04114 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOBP04114 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
APOBP04114 AC136604.1-201ENST00000418535 575 ntBASIC10.03□□□□□ -0.8
APOBP04114 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC10.03□□□□□ -0.8
APOBP04114 RNF41-210ENST00000552244 716 ntTSL 3 BASIC10.03□□□□□ -0.8
APOBP04114 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC10.03□□□□□ -0.8
APOBP04114 AC120045.2-201ENST00000567334 178 ntBASIC10.03□□□□□ -0.8
APOBP04114 AP001063.1-201ENST00000568332 529 ntBASIC10.03□□□□□ -0.8
APOBP04114 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC10.03□□□□□ -0.8
APOBP04114 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC10.03□□□□□ -0.8
APOBP04114 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC10.03□□□□□ -0.8
APOBP04114 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC10.03□□□□□ -0.8
APOBP04114 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOBP04114 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
APOBP04114 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC10.03□□□□□ -0.8
APOBP04114 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC10.03□□□□□ -0.8
APOBP04114 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
APOBP04114 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
APOBP04114 AMT-206ENST00000458307 1860 ntTSL 2 BASIC10.03□□□□□ -0.8
APOBP04114 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC10.03□□□□□ -0.8
APOBP04114 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
APOBP04114 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC10.03□□□□□ -0.8
APOBP04114 AL355864.2-201ENST00000447420 863 ntBASIC10.03□□□□□ -0.8
APOBP04114 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC10.03□□□□□ -0.8
APOBP04114 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC10.03□□□□□ -0.8
APOBP04114 AC079316.1-201ENST00000548397 411 ntBASIC10.03□□□□□ -0.8
APOBP04114 RN7SL48P-201ENST00000579283 293 ntBASIC10.03□□□□□ -0.8
APOBP04114 AL451050.2-201ENST00000606967 682 ntBASIC10.03□□□□□ -0.8
APOBP04114 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC10.03□□□□□ -0.8
APOBP04114 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOBP04114 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOBP04114 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC10.03□□□□□ -0.8
APOBP04114 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOBP04114 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
APOBP04114 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC10.03□□□□□ -0.8
APOBP04114 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOBP04114 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOBP04114 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
APOBP04114 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOBP04114 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
APOBP04114 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
APOBP04114 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC10.03□□□□□ -0.8
APOBP04114 PTK2-225ENST00000520892 571 ntTSL 4 BASIC10.03□□□□□ -0.8
APOBP04114 PRKXP1-201ENST00000561423 1122 ntBASIC10.03□□□□□ -0.8
APOBP04114 MIR4741-201ENST00000579822 90 ntBASIC10.03□□□□□ -0.8
APOBP04114 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
APOBP04114 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC10.03□□□□□ -0.8
APOBP04114 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOBP04114 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC10.03□□□□□ -0.8
APOBP04114 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC10.03□□□□□ -0.8
APOBP04114 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
APOBP04114 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOBP04114 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC10.03□□□□□ -0.8
APOBP04114 AL603756.1-201ENST00000606511 2163 ntBASIC10.03□□□□□ -0.8
APOBP04114 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOBP04114 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
APOBP04114 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
APOBP04114 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
APOBP04114 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
APOBP04114 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC10.02□□□□□ -0.8
APOBP04114 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC10.02□□□□□ -0.8
APOBP04114 YBX1P6-201ENST00000442962 1002 ntBASIC10.02□□□□□ -0.8
APOBP04114 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
APOBP04114 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC10.02□□□□□ -0.8
APOBP04114 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC10.02□□□□□ -0.8
APOBP04114 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
APOBP04114 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
APOBP04114 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
APOBP04114 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
APOBP04114 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
APOBP04114 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC10.02□□□□□ -0.81
APOBP04114 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC10.02□□□□□ -0.81
APOBP04114 ELP6-209ENST00000446787 894 ntTSL 3 BASIC10.02□□□□□ -0.81
APOBP04114 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC10.02□□□□□ -0.81
APOBP04114 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
APOBP04114 AC016396.2-201ENST00000562575 1417 ntBASIC10.02□□□□□ -0.81
APOBP04114 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
APOBP04114 GPAA1P2-202ENST00000606848 1787 ntBASIC10.02□□□□□ -0.81
APOBP04114 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC10.02□□□□□ -0.81
APOBP04114 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
APOBP04114 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
APOBP04114 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
APOBP04114 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
APOBP04114 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC10.02□□□□□ -0.81
APOBP04114 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
APOBP04114 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
APOBP04114 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
APOBP04114 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
APOBP04114 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC10.02□□□□□ -0.81
APOBP04114 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms