Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.88■□□□□ 0.29
MT-CO1P00395 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.88■□□□□ 0.29
MT-CO1P00395 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-CO1P00395 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.88■□□□□ 0.29
MT-CO1P00395 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-CO1P00395 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-CO1P00395 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-CO1P00395 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.87■□□□□ 0.29
MT-CO1P00395 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.87■□□□□ 0.29
MT-CO1P00395 AL031731.1-201ENST00000642131 2094 ntBASIC16.87■□□□□ 0.29
MT-CO1P00395 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-CO1P00395 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
MT-CO1P00395 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
MT-CO1P00395 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
MT-CO1P00395 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-CO1P00395 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
MT-CO1P00395 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.87■□□□□ 0.29
MT-CO1P00395 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MT-CO1P00395 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.87■□□□□ 0.29
MT-CO1P00395 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.87■□□□□ 0.29
MT-CO1P00395 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.87■□□□□ 0.29
MT-CO1P00395 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MT-CO1P00395 AC109322.1-201ENST00000524499 1264 ntBASIC16.87■□□□□ 0.29
MT-CO1P00395 AC027307.2-201ENST00000591252 911 ntBASIC16.87■□□□□ 0.29
MT-CO1P00395 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-CO1P00395 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MT-CO1P00395 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
MT-CO1P00395 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-CO1P00395 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-CO1P00395 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MT-CO1P00395 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
MT-CO1P00395 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MT-CO1P00395 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.87■□□□□ 0.29
MT-CO1P00395 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
MT-CO1P00395 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MT-CO1P00395 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
MT-CO1P00395 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.87■□□□□ 0.29
MT-CO1P00395 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
MT-CO1P00395 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-CO1P00395 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.87■□□□□ 0.29
MT-CO1P00395 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-CO1P00395 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-CO1P00395 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.86■□□□□ 0.29
MT-CO1P00395 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.86■□□□□ 0.29
MT-CO1P00395 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MT-CO1P00395 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.86■□□□□ 0.29
MT-CO1P00395 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
MT-CO1P00395 UXT-AS1-201ENST00000590504 1525 ntBASIC16.86■□□□□ 0.29
MT-CO1P00395 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.86■□□□□ 0.29
MT-CO1P00395 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-CO1P00395 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-CO1P00395 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-CO1P00395 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
MT-CO1P00395 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
MT-CO1P00395 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-CO1P00395 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.86■□□□□ 0.29
MT-CO1P00395 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MT-CO1P00395 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-CO1P00395 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MT-CO1P00395 HLA-J-203ENST00000494367 1087 ntBASIC16.86■□□□□ 0.29
MT-CO1P00395 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-CO1P00395 IGHV3-62-201ENST00000520057 340 ntBASIC16.86■□□□□ 0.29
MT-CO1P00395 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MT-CO1P00395 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.86■□□□□ 0.29
MT-CO1P00395 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.86■□□□□ 0.29
MT-CO1P00395 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.86■□□□□ 0.29
MT-CO1P00395 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-CO1P00395 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-CO1P00395 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.86■□□□□ 0.29
MT-CO1P00395 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-CO1P00395 AC093028.1-201ENST00000622998 982 ntBASIC16.86■□□□□ 0.29
MT-CO1P00395 AC008267.7-201ENST00000624570 1194 ntBASIC16.86■□□□□ 0.29
MT-CO1P00395 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-CO1P00395 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MT-CO1P00395 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
MT-CO1P00395 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-CO1P00395 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-CO1P00395 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-CO1P00395 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-CO1P00395 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
MT-CO1P00395 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-CO1P00395 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.86■□□□□ 0.29
MT-CO1P00395 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-CO1P00395 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MT-CO1P00395 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
MT-CO1P00395 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.86■□□□□ 0.29
MT-CO1P00395 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-CO1P00395 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
MT-CO1P00395 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
MT-CO1P00395 AC006538.1-201ENST00000567905 1585 ntBASIC16.85■□□□□ 0.29
MT-CO1P00395 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-CO1P00395 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-CO1P00395 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-CO1P00395 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-CO1P00395 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
MT-CO1P00395 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-CO1P00395 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
MT-CO1P00395 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
MT-CO1P00395 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-CO1P00395 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms