Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SIX6O95475 ST20-AS1-201ENST00000560255 4223 ntBASIC13.82□□□□□ -0.2
SIX6O95475 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.82□□□□□ -0.2
SIX6O95475 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.82□□□□□ -0.2
SIX6O95475 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SIX6O95475 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 TMBIM7P-203ENST00000641617 1718 ntBASIC13.81□□□□□ -0.2
SIX6O95475 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.81□□□□□ -0.2
SIX6O95475 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.81□□□□□ -0.2
SIX6O95475 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.81□□□□□ -0.2
SIX6O95475 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.81□□□□□ -0.2
SIX6O95475 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
SIX6O95475 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.81□□□□□ -0.2
SIX6O95475 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SIX6O95475 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.81□□□□□ -0.2
SIX6O95475 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.81□□□□□ -0.2
SIX6O95475 PENK-204ENST00000518770 863 ntTSL 2 BASIC13.81□□□□□ -0.2
SIX6O95475 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.81□□□□□ -0.2
SIX6O95475 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.81□□□□□ -0.2
SIX6O95475 AL136038.4-201ENST00000603606 1261 ntBASIC13.81□□□□□ -0.2
SIX6O95475 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC13.81□□□□□ -0.2
SIX6O95475 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.81□□□□□ -0.2
SIX6O95475 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.81□□□□□ -0.2
SIX6O95475 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.81□□□□□ -0.2
SIX6O95475 AC097376.2-205ENST00000610159 5334 ntBASIC13.81□□□□□ -0.2
SIX6O95475 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.81□□□□□ -0.2
SIX6O95475 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.81□□□□□ -0.2
SIX6O95475 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SIX6O95475 AL353692.3-201ENST00000407031 1396 ntBASIC13.81□□□□□ -0.2
SIX6O95475 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 GRK6P1-201ENST00000400595 1711 ntBASIC13.81□□□□□ -0.2
SIX6O95475 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.81□□□□□ -0.2
SIX6O95475 AC117489.1-201ENST00000625169 3217 ntBASIC13.81□□□□□ -0.2
SIX6O95475 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SIX6O95475 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIX6O95475 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SIX6O95475 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIX6O95475 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SIX6O95475 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIX6O95475 AC007191.1-201ENST00000623179 2995 ntBASIC13.8□□□□□ -0.2
SIX6O95475 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.8□□□□□ -0.2
SIX6O95475 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIX6O95475 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.8□□□□□ -0.2
SIX6O95475 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.8□□□□□ -0.2
SIX6O95475 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
SIX6O95475 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SIX6O95475 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.8□□□□□ -0.2
SIX6O95475 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
SIX6O95475 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SIX6O95475 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SIX6O95475 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIX6O95475 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIX6O95475 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.8□□□□□ -0.2
SIX6O95475 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.8□□□□□ -0.2
SIX6O95475 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SIX6O95475 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SIX6O95475 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SIX6O95475 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.8□□□□□ -0.2
SIX6O95475 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SIX6O95475 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.8□□□□□ -0.2
SIX6O95475 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIX6O95475 AP003733.1-201ENST00000491725 852 ntBASIC13.8□□□□□ -0.2
SIX6O95475 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.8□□□□□ -0.2
SIX6O95475 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms