Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.56■□□□□ 0.24
GPC4O75487 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.56■□□□□ 0.24
GPC4O75487 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.56■□□□□ 0.24
GPC4O75487 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GPC4O75487 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
GPC4O75487 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
GPC4O75487 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.56■□□□□ 0.24
GPC4O75487 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
GPC4O75487 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.55■□□□□ 0.24
GPC4O75487 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
GPC4O75487 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.55■□□□□ 0.24
GPC4O75487 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.55■□□□□ 0.24
GPC4O75487 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GPC4O75487 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
GPC4O75487 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GPC4O75487 AL353732.1-201ENST00000569618 1459 ntBASIC16.55■□□□□ 0.24
GPC4O75487 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GPC4O75487 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GPC4O75487 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.55■□□□□ 0.24
GPC4O75487 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GPC4O75487 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.55■□□□□ 0.24
GPC4O75487 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.55■□□□□ 0.24
GPC4O75487 AC106730.1-201ENST00000566722 1090 ntBASIC16.55■□□□□ 0.24
GPC4O75487 AC005412.3-201ENST00000580309 715 ntBASIC16.55■□□□□ 0.24
GPC4O75487 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.55■□□□□ 0.24
GPC4O75487 AC120114.3-201ENST00000611923 658 ntBASIC16.55■□□□□ 0.24
GPC4O75487 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.55■□□□□ 0.24
GPC4O75487 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.55■□□□□ 0.24
GPC4O75487 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GPC4O75487 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GPC4O75487 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GPC4O75487 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GPC4O75487 SLC22A20-204ENST00000530038 1673 ntBASIC16.55■□□□□ 0.24
GPC4O75487 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GPC4O75487 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GPC4O75487 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.55■□□□□ 0.24
GPC4O75487 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GPC4O75487 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GPC4O75487 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GPC4O75487 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GPC4O75487 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GPC4O75487 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GPC4O75487 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GPC4O75487 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.54■□□□□ 0.24
GPC4O75487 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GPC4O75487 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.54■□□□□ 0.24
GPC4O75487 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GPC4O75487 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GPC4O75487 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
GPC4O75487 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GPC4O75487 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
GPC4O75487 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GPC4O75487 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GPC4O75487 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GPC4O75487 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GPC4O75487 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.54■□□□□ 0.24
GPC4O75487 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
GPC4O75487 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.54■□□□□ 0.24
GPC4O75487 PMS2P1-201ENST00000431037 1228 ntBASIC16.54■□□□□ 0.24
GPC4O75487 CXCL1P1-201ENST00000502804 216 ntBASIC16.54■□□□□ 0.24
GPC4O75487 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.54■□□□□ 0.24
GPC4O75487 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.54■□□□□ 0.24
GPC4O75487 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GPC4O75487 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.54■□□□□ 0.24
GPC4O75487 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
GPC4O75487 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GPC4O75487 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GPC4O75487 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GPC4O75487 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
GPC4O75487 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GPC4O75487 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
GPC4O75487 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
GPC4O75487 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GPC4O75487 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
GPC4O75487 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.54■□□□□ 0.24
GPC4O75487 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.53■□□□□ 0.24
GPC4O75487 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.53■□□□□ 0.24
GPC4O75487 AC131009.4-201ENST00000624048 1740 ntBASIC16.53■□□□□ 0.24
GPC4O75487 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.53■□□□□ 0.24
GPC4O75487 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
GPC4O75487 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GPC4O75487 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GPC4O75487 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GPC4O75487 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC4O75487 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GPC4O75487 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
GPC4O75487 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC4O75487 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC4O75487 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.53■□□□□ 0.24
GPC4O75487 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.53■□□□□ 0.24
GPC4O75487 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC4O75487 AC007326.2-201ENST00000624224 7579 ntBASIC16.53■□□□□ 0.24
GPC4O75487 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.53■□□□□ 0.24
GPC4O75487 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.53■□□□□ 0.24
GPC4O75487 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC4O75487 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC4O75487 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
GPC4O75487 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.53■□□□□ 0.24
GPC4O75487 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.53■□□□□ 0.24
GPC4O75487 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms