Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 AC148477.4-201ENST00000613430 1793 ntBASIC14.69□□□□□ -0.06
PFDN1O60925 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.69□□□□□ -0.06
PFDN1O60925 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.69□□□□□ -0.06
PFDN1O60925 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
PFDN1O60925 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.69□□□□□ -0.06
PFDN1O60925 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.69□□□□□ -0.06
PFDN1O60925 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.69□□□□□ -0.06
PFDN1O60925 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PFDN1O60925 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.68□□□□□ -0.06
PFDN1O60925 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PFDN1O60925 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
PFDN1O60925 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PFDN1O60925 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PFDN1O60925 AC087481.3-201ENST00000602886 1894 ntBASIC14.68□□□□□ -0.06
PFDN1O60925 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PFDN1O60925 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PFDN1O60925 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
PFDN1O60925 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.68□□□□□ -0.06
PFDN1O60925 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PFDN1O60925 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PFDN1O60925 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
PFDN1O60925 AC073210.2-201ENST00000430369 194 ntBASIC14.68□□□□□ -0.06
PFDN1O60925 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.68□□□□□ -0.06
PFDN1O60925 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC14.68□□□□□ -0.06
PFDN1O60925 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PFDN1O60925 RAP2CP1-201ENST00000605103 478 ntBASIC14.68□□□□□ -0.06
PFDN1O60925 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PFDN1O60925 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PFDN1O60925 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.68□□□□□ -0.06
PFDN1O60925 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.68□□□□□ -0.06
PFDN1O60925 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.68□□□□□ -0.06
PFDN1O60925 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PFDN1O60925 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.68□□□□□ -0.06
PFDN1O60925 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.68□□□□□ -0.06
PFDN1O60925 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
PFDN1O60925 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.68□□□□□ -0.06
PFDN1O60925 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
PFDN1O60925 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PFDN1O60925 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PFDN1O60925 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PFDN1O60925 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.67□□□□□ -0.06
PFDN1O60925 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PFDN1O60925 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PFDN1O60925 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.67□□□□□ -0.06
PFDN1O60925 KRT8P41-201ENST00000533985 1514 ntBASIC14.67□□□□□ -0.06
PFDN1O60925 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.67□□□□□ -0.06
PFDN1O60925 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.67□□□□□ -0.06
PFDN1O60925 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PFDN1O60925 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PFDN1O60925 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PFDN1O60925 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PFDN1O60925 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PFDN1O60925 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PFDN1O60925 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PFDN1O60925 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PFDN1O60925 MIR564-202ENST00000385049 94 ntBASIC14.67□□□□□ -0.06
PFDN1O60925 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.67□□□□□ -0.06
PFDN1O60925 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.67□□□□□ -0.06
PFDN1O60925 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.67□□□□□ -0.06
PFDN1O60925 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
PFDN1O60925 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.67□□□□□ -0.06
PFDN1O60925 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC14.67□□□□□ -0.06
PFDN1O60925 AC069236.1-201ENST00000604339 616 ntBASIC14.67□□□□□ -0.06
PFDN1O60925 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC14.67□□□□□ -0.06
PFDN1O60925 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PFDN1O60925 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.67□□□□□ -0.06
PFDN1O60925 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PFDN1O60925 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PFDN1O60925 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.67□□□□□ -0.06
PFDN1O60925 AC002310.6-201ENST00000624451 1377 ntBASIC14.67□□□□□ -0.06
PFDN1O60925 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PFDN1O60925 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PFDN1O60925 MROH4P-201ENST00000431302 1578 ntBASIC14.67□□□□□ -0.06
PFDN1O60925 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PFDN1O60925 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PFDN1O60925 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PFDN1O60925 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PFDN1O60925 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC14.67□□□□□ -0.06
PFDN1O60925 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PFDN1O60925 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PFDN1O60925 FGD5P1-202ENST00000614866 2498 ntBASIC14.67□□□□□ -0.06
PFDN1O60925 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms