Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.91■□□□□ 0.94
KCNQ3O43525 HTR7P1-202ENST00000624664 4411 ntBASIC20.91■□□□□ 0.94
KCNQ3O43525 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
KCNQ3O43525 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
KCNQ3O43525 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KCNQ3O43525 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ3O43525 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ3O43525 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
KCNQ3O43525 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.9■□□□□ 0.94
KCNQ3O43525 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ3O43525 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ3O43525 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC20.9■□□□□ 0.94
KCNQ3O43525 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ3O43525 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
KCNQ3O43525 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ3O43525 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
KCNQ3O43525 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.9■□□□□ 0.94
KCNQ3O43525 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC20.9■□□□□ 0.94
KCNQ3O43525 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC20.9■□□□□ 0.94
KCNQ3O43525 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ3O43525 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ3O43525 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC20.9■□□□□ 0.94
KCNQ3O43525 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC20.9■□□□□ 0.94
KCNQ3O43525 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ3O43525 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ3O43525 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.9■□□□□ 0.94
KCNQ3O43525 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.9■□□□□ 0.94
KCNQ3O43525 AC026979.3-201ENST00000607315 403 ntBASIC20.9■□□□□ 0.94
KCNQ3O43525 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.9■□□□□ 0.94
KCNQ3O43525 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.9■□□□□ 0.94
KCNQ3O43525 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ3O43525 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
KCNQ3O43525 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
KCNQ3O43525 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ3O43525 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KCNQ3O43525 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
KCNQ3O43525 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KCNQ3O43525 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KCNQ3O43525 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
KCNQ3O43525 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
KCNQ3O43525 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KCNQ3O43525 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KCNQ3O43525 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KCNQ3O43525 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.89■□□□□ 0.94
KCNQ3O43525 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
KCNQ3O43525 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KCNQ3O43525 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KCNQ3O43525 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KCNQ3O43525 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
KCNQ3O43525 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNQ3O43525 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNQ3O43525 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNQ3O43525 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNQ3O43525 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
KCNQ3O43525 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC20.89■□□□□ 0.93
KCNQ3O43525 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KCNQ3O43525 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
KCNQ3O43525 AL353779.1-201ENST00000434793 351 ntBASIC20.89■□□□□ 0.93
KCNQ3O43525 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KCNQ3O43525 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.89■□□□□ 0.93
KCNQ3O43525 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.89■□□□□ 0.93
KCNQ3O43525 PAM16-215ENST00000577031 548 ntTSL 4 BASIC20.89■□□□□ 0.93
KCNQ3O43525 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20.89■□□□□ 0.93
KCNQ3O43525 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
KCNQ3O43525 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.89■□□□□ 0.93
KCNQ3O43525 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNQ3O43525 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
KCNQ3O43525 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNQ3O43525 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KCNQ3O43525 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ3O43525 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ3O43525 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ3O43525 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ3O43525 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ3O43525 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ3O43525 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ3O43525 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ3O43525 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ3O43525 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ3O43525 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ3O43525 CD81-207ENST00000481687 890 ntTSL 2 BASIC20.88■□□□□ 0.93
KCNQ3O43525 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ3O43525 CR383656.12-201ENST00000549567 513 ntBASIC20.88■□□□□ 0.93
KCNQ3O43525 AC023310.3-201ENST00000557027 670 ntBASIC20.88■□□□□ 0.93
KCNQ3O43525 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC20.88■□□□□ 0.93
KCNQ3O43525 AC100756.1-201ENST00000562736 682 ntBASIC20.88■□□□□ 0.93
KCNQ3O43525 AC138749.3-201ENST00000567691 622 ntBASIC20.88■□□□□ 0.93
KCNQ3O43525 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC20.88■□□□□ 0.93
KCNQ3O43525 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ3O43525 AC116165.1-201ENST00000611806 668 ntBASIC20.88■□□□□ 0.93
KCNQ3O43525 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC20.88■□□□□ 0.93
KCNQ3O43525 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ3O43525 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ3O43525 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ3O43525 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
KCNQ3O43525 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
KCNQ3O43525 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC20.88■□□□□ 0.93
KCNQ3O43525 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ3O43525 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KCNQ3O43525 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms