Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HOXA2O43364 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA2O43364 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
HOXA2O43364 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA2O43364 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA2O43364 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXA2O43364 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA2O43364 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.46■□□□□ 0.39
HOXA2O43364 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA2O43364 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.46■□□□□ 0.39
HOXA2O43364 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA2O43364 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
HOXA2O43364 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
HOXA2O43364 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA2O43364 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA2O43364 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.46■□□□□ 0.39
HOXA2O43364 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA2O43364 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA2O43364 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA2O43364 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA2O43364 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
HOXA2O43364 ARSEP1-201ENST00000420443 635 ntBASIC17.46■□□□□ 0.39
HOXA2O43364 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.46■□□□□ 0.39
HOXA2O43364 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
HOXA2O43364 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.46■□□□□ 0.39
HOXA2O43364 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.46■□□□□ 0.39
HOXA2O43364 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.46■□□□□ 0.39
HOXA2O43364 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.46■□□□□ 0.39
HOXA2O43364 TIMM17BP1-201ENST00000545713 516 ntBASIC17.46■□□□□ 0.39
HOXA2O43364 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
HOXA2O43364 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.46■□□□□ 0.39
HOXA2O43364 RRP7BP-205ENST00000566851 833 ntBASIC17.46■□□□□ 0.39
HOXA2O43364 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.46■□□□□ 0.39
HOXA2O43364 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.46■□□□□ 0.39
HOXA2O43364 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.46■□□□□ 0.39
HOXA2O43364 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.46■□□□□ 0.39
HOXA2O43364 AC004790.1-201ENST00000612686 536 ntBASIC17.46■□□□□ 0.39
HOXA2O43364 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.46■□□□□ 0.39
HOXA2O43364 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.46■□□□□ 0.39
HOXA2O43364 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA2O43364 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
HOXA2O43364 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA2O43364 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA2O43364 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA2O43364 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXA2O43364 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HOXA2O43364 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HOXA2O43364 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
HOXA2O43364 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.38
HOXA2O43364 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.45■□□□□ 0.38
HOXA2O43364 GGT3P-204ENST00000453783 1664 ntBASIC17.45■□□□□ 0.38
HOXA2O43364 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA2O43364 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA2O43364 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA2O43364 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA2O43364 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA2O43364 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA2O43364 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA2O43364 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HOXA2O43364 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXA2O43364 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXA2O43364 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.45■□□□□ 0.38
HOXA2O43364 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA2O43364 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.45■□□□□ 0.38
HOXA2O43364 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXA2O43364 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
HOXA2O43364 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.45■□□□□ 0.38
HOXA2O43364 AC092337.1-201ENST00000568699 1129 ntBASIC17.45■□□□□ 0.38
HOXA2O43364 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA2O43364 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.45■□□□□ 0.38
HOXA2O43364 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA2O43364 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA2O43364 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HOXA2O43364 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXA2O43364 AL133373.2-201ENST00000623187 2828 ntBASIC17.45■□□□□ 0.38
HOXA2O43364 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXA2O43364 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA2O43364 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA2O43364 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXA2O43364 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXA2O43364 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA2O43364 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.44■□□□□ 0.38
HOXA2O43364 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HOXA2O43364 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA2O43364 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.44■□□□□ 0.38
HOXA2O43364 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA2O43364 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA2O43364 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA2O43364 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA2O43364 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
HOXA2O43364 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
HOXA2O43364 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA2O43364 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA2O43364 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA2O43364 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HOXA2O43364 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA2O43364 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXA2O43364 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HOXA2O43364 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.44■□□□□ 0.38
HOXA2O43364 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms