Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC011676.5-201ENST00000624864 2660 ntBASIC15□□□□□ -0.01
NPIPA2E9PIF3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 AC078925.2-201ENST00000624013 1973 ntBASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 MIR943-201ENST00000401286 94 ntBASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 KLF2P3-201ENST00000451977 1087 ntBASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 AC125807.1-201ENST00000483097 614 ntBASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 MIR4492-201ENST00000581627 80 ntBASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 AC021097.1-201ENST00000607902 574 ntBASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 AC009053.2-201ENST00000563701 2365 ntBASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
NPIPA2E9PIF3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 SPDYE7P-202ENST00000420373 878 ntBASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 AP000842.3-202ENST00000569238 1080 ntBASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms