Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 AC148477.5-201ENST00000625164 1645 ntBASIC17.91■□□□□ 0.46
CCDC66A2RUB6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 NUS1P1-201ENST00000446295 882 ntBASIC17.91■□□□□ 0.46
CCDC66A2RUB6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 TOB2P1-201ENST00000469761 992 ntBASIC17.91■□□□□ 0.46
CCDC66A2RUB6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 AC114341.1-201ENST00000618070 349 ntBASIC17.91■□□□□ 0.46
CCDC66A2RUB6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
CCDC66A2RUB6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 HLA-A-202ENST00000376806 1854 ntBASIC17.9■□□□□ 0.46
CCDC66A2RUB6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 SPDYE21P-201ENST00000413323 827 ntBASIC17.9■□□□□ 0.46
CCDC66A2RUB6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 IGHV3-47-201ENST00000425060 335 ntBASIC17.9■□□□□ 0.46
CCDC66A2RUB6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 AP002383.4-201ENST00000442518 975 ntBASIC17.9■□□□□ 0.46
CCDC66A2RUB6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC66A2RUB6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC66A2RUB6 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC17.89■□□□□ 0.46
CCDC66A2RUB6 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms