Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHA2Q9Y5H9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHA2Q9Y5H9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHA2Q9Y5H9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHA2Q9Y5H9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHA2Q9Y5H9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
PCDHA2Q9Y5H9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHA2Q9Y5H9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHA2Q9Y5H9 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHA2Q9Y5H9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHA2Q9Y5H9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHA2Q9Y5H9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHA2Q9Y5H9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
PCDHA2Q9Y5H9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHA2Q9Y5H9 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHA2Q9Y5H9 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.71■■□□□ 1.87
PCDHA2Q9Y5H9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.71■■□□□ 1.87
PCDHA2Q9Y5H9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.71■■□□□ 1.87
PCDHA2Q9Y5H9 AL031848.2-201ENST00000607670 837 ntBASIC26.71■■□□□ 1.87
PCDHA2Q9Y5H9 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHA2Q9Y5H9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.71■■□□□ 1.87
PCDHA2Q9Y5H9 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.87
PCDHA2Q9Y5H9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PCDHA2Q9Y5H9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
PCDHA2Q9Y5H9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.7■■□□□ 1.86
PCDHA2Q9Y5H9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.69■■□□□ 1.86
PCDHA2Q9Y5H9 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHA2Q9Y5H9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHA2Q9Y5H9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
PCDHA2Q9Y5H9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.69■■□□□ 1.86
PCDHA2Q9Y5H9 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHA2Q9Y5H9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.69■■□□□ 1.86
PCDHA2Q9Y5H9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.69■■□□□ 1.86
PCDHA2Q9Y5H9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHA2Q9Y5H9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHA2Q9Y5H9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHA2Q9Y5H9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHA2Q9Y5H9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.68■■□□□ 1.86
PCDHA2Q9Y5H9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHA2Q9Y5H9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
PCDHA2Q9Y5H9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.67■■□□□ 1.86
PCDHA2Q9Y5H9 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.66■■□□□ 1.86
PCDHA2Q9Y5H9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.66■■□□□ 1.86
PCDHA2Q9Y5H9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHA2Q9Y5H9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
PCDHA2Q9Y5H9 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHA2Q9Y5H9 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.65■■□□□ 1.86
PCDHA2Q9Y5H9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHA2Q9Y5H9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHA2Q9Y5H9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHA2Q9Y5H9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHA2Q9Y5H9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHA2Q9Y5H9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
PCDHA2Q9Y5H9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PCDHA2Q9Y5H9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PCDHA2Q9Y5H9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PCDHA2Q9Y5H9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
PCDHA2Q9Y5H9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.63■■□□□ 1.85
PCDHA2Q9Y5H9 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.63■■□□□ 1.85
PCDHA2Q9Y5H9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.63■■□□□ 1.85
PCDHA2Q9Y5H9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.63■■□□□ 1.85
PCDHA2Q9Y5H9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
PCDHA2Q9Y5H9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHA2Q9Y5H9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHA2Q9Y5H9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHA2Q9Y5H9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
PCDHA2Q9Y5H9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHA2Q9Y5H9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.62■■□□□ 1.85
PCDHA2Q9Y5H9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHA2Q9Y5H9 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.62■■□□□ 1.85
PCDHA2Q9Y5H9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHA2Q9Y5H9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
PCDHA2Q9Y5H9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.61■■□□□ 1.85
PCDHA2Q9Y5H9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.61■■□□□ 1.85
PCDHA2Q9Y5H9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
PCDHA2Q9Y5H9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHA2Q9Y5H9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
PCDHA2Q9Y5H9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHA2Q9Y5H9 AC020928.2-201ENST00000588717 2197 ntBASIC26.6■■□□□ 1.85
PCDHA2Q9Y5H9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHA2Q9Y5H9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.6■■□□□ 1.85
PCDHA2Q9Y5H9 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.6■■□□□ 1.85
PCDHA2Q9Y5H9 AC022616.5-201ENST00000518796 181 ntBASIC26.6■■□□□ 1.85
PCDHA2Q9Y5H9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.59■■□□□ 1.85
PCDHA2Q9Y5H9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHA2Q9Y5H9 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHA2Q9Y5H9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHA2Q9Y5H9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHA2Q9Y5H9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.59■■□□□ 1.85
PCDHA2Q9Y5H9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
PCDHA2Q9Y5H9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.59■■□□□ 1.85
PCDHA2Q9Y5H9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
PCDHA2Q9Y5H9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHA2Q9Y5H9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
PCDHA2Q9Y5H9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHA2Q9Y5H9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
PCDHA2Q9Y5H9 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHA2Q9Y5H9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHA2Q9Y5H9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHA2Q9Y5H9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.57■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms