Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGA7Q9Y5G6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.48■■□□□ 1.35
PCDHGA7Q9Y5G6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGA7Q9Y5G6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGA7Q9Y5G6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.48■■□□□ 1.35
PCDHGA7Q9Y5G6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA7Q9Y5G6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA7Q9Y5G6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.47■■□□□ 1.35
PCDHGA7Q9Y5G6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA7Q9Y5G6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.47■■□□□ 1.35
PCDHGA7Q9Y5G6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
PCDHGA7Q9Y5G6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA7Q9Y5G6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA7Q9Y5G6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA7Q9Y5G6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA7Q9Y5G6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGA7Q9Y5G6 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.46■■□□□ 1.35
PCDHGA7Q9Y5G6 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.46■■□□□ 1.35
PCDHGA7Q9Y5G6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.34
PCDHGA7Q9Y5G6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGA7Q9Y5G6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGA7Q9Y5G6 AL592295.1-201ENST00000400984 884 ntBASIC23.45■■□□□ 1.34
PCDHGA7Q9Y5G6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.45■■□□□ 1.34
PCDHGA7Q9Y5G6 MIR4508-201ENST00000584178 70 ntBASIC23.45■■□□□ 1.34
PCDHGA7Q9Y5G6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
PCDHGA7Q9Y5G6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
PCDHGA7Q9Y5G6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGA7Q9Y5G6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGA7Q9Y5G6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.44■■□□□ 1.34
PCDHGA7Q9Y5G6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGA7Q9Y5G6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGA7Q9Y5G6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGA7Q9Y5G6 PVT1_1.1-201ENST00000615125 194 ntBASIC23.44■■□□□ 1.34
PCDHGA7Q9Y5G6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
PCDHGA7Q9Y5G6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGA7Q9Y5G6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGA7Q9Y5G6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGA7Q9Y5G6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
PCDHGA7Q9Y5G6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.42■■□□□ 1.34
PCDHGA7Q9Y5G6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDHGA7Q9Y5G6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.42■■□□□ 1.34
PCDHGA7Q9Y5G6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.42■■□□□ 1.34
PCDHGA7Q9Y5G6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGA7Q9Y5G6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGA7Q9Y5G6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGA7Q9Y5G6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGA7Q9Y5G6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGA7Q9Y5G6 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.41■■□□□ 1.34
PCDHGA7Q9Y5G6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGA7Q9Y5G6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGA7Q9Y5G6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDHGA7Q9Y5G6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGA7Q9Y5G6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGA7Q9Y5G6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.4■■□□□ 1.34
PCDHGA7Q9Y5G6 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.4■■□□□ 1.34
PCDHGA7Q9Y5G6 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDHGA7Q9Y5G6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.4■■□□□ 1.34
PCDHGA7Q9Y5G6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.4■■□□□ 1.34
PCDHGA7Q9Y5G6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PCDHGA7Q9Y5G6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGA7Q9Y5G6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGA7Q9Y5G6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGA7Q9Y5G6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGA7Q9Y5G6 GUSBP5-201ENST00000418136 578 ntBASIC23.39■■□□□ 1.33
PCDHGA7Q9Y5G6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.39■■□□□ 1.33
PCDHGA7Q9Y5G6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PCDHGA7Q9Y5G6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
PCDHGA7Q9Y5G6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGA7Q9Y5G6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGA7Q9Y5G6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHGA7Q9Y5G6 AC010501.1-201ENST00000606270 1962 ntBASIC23.38■■□□□ 1.33
PCDHGA7Q9Y5G6 WHAMMP3-201ENST00000611636 1609 ntBASIC23.37■■□□□ 1.33
PCDHGA7Q9Y5G6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGA7Q9Y5G6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGA7Q9Y5G6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGA7Q9Y5G6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGA7Q9Y5G6 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.37■■□□□ 1.33
PCDHGA7Q9Y5G6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.37■■□□□ 1.33
PCDHGA7Q9Y5G6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
PCDHGA7Q9Y5G6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDHGA7Q9Y5G6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA7Q9Y5G6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA7Q9Y5G6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDHGA7Q9Y5G6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
PCDHGA7Q9Y5G6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.36■■□□□ 1.33
PCDHGA7Q9Y5G6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGA7Q9Y5G6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
PCDHGA7Q9Y5G6 AC142381.3-201ENST00000568208 1670 ntBASIC23.35■■□□□ 1.33
PCDHGA7Q9Y5G6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGA7Q9Y5G6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGA7Q9Y5G6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.35■■□□□ 1.33
PCDHGA7Q9Y5G6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDHGA7Q9Y5G6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.35■■□□□ 1.33
PCDHGA7Q9Y5G6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGA7Q9Y5G6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGA7Q9Y5G6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.34■■□□□ 1.33
PCDHGA7Q9Y5G6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGA7Q9Y5G6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGA7Q9Y5G6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGA7Q9Y5G6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms