Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.67■□□□□ 0.9
FOXJ3Q9UPW0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXJ3Q9UPW0 SLC6A10P-202ENST00000431994 2058 ntBASIC20.67■□□□□ 0.9
FOXJ3Q9UPW0 CR559946.2-201ENST00000623684 991 ntBASIC20.67■□□□□ 0.9
FOXJ3Q9UPW0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
FOXJ3Q9UPW0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
FOXJ3Q9UPW0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXJ3Q9UPW0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXJ3Q9UPW0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXJ3Q9UPW0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXJ3Q9UPW0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXJ3Q9UPW0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
FOXJ3Q9UPW0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXJ3Q9UPW0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.66■□□□□ 0.9
FOXJ3Q9UPW0 AC126177.7-201ENST00000547904 679 ntBASIC20.66■□□□□ 0.9
FOXJ3Q9UPW0 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXJ3Q9UPW0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXJ3Q9UPW0 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXJ3Q9UPW0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXJ3Q9UPW0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
FOXJ3Q9UPW0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
FOXJ3Q9UPW0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXJ3Q9UPW0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXJ3Q9UPW0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXJ3Q9UPW0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXJ3Q9UPW0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
FOXJ3Q9UPW0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXJ3Q9UPW0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXJ3Q9UPW0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXJ3Q9UPW0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXJ3Q9UPW0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXJ3Q9UPW0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
FOXJ3Q9UPW0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
FOXJ3Q9UPW0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
FOXJ3Q9UPW0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.63■□□□□ 0.89
FOXJ3Q9UPW0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXJ3Q9UPW0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXJ3Q9UPW0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.63■□□□□ 0.89
FOXJ3Q9UPW0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
FOXJ3Q9UPW0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
FOXJ3Q9UPW0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXJ3Q9UPW0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXJ3Q9UPW0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXJ3Q9UPW0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
FOXJ3Q9UPW0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
FOXJ3Q9UPW0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXJ3Q9UPW0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXJ3Q9UPW0 LINC00543-201ENST00000567234 1845 ntBASIC20.62■□□□□ 0.89
FOXJ3Q9UPW0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXJ3Q9UPW0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
FOXJ3Q9UPW0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXJ3Q9UPW0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXJ3Q9UPW0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.62■□□□□ 0.89
FOXJ3Q9UPW0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXJ3Q9UPW0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXJ3Q9UPW0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
FOXJ3Q9UPW0 AC068473.5-201ENST00000616428 2072 ntBASIC20.62■□□□□ 0.89
FOXJ3Q9UPW0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXJ3Q9UPW0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXJ3Q9UPW0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
FOXJ3Q9UPW0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FOXJ3Q9UPW0 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXJ3Q9UPW0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.6■□□□□ 0.89
FOXJ3Q9UPW0 AC141586.4-201ENST00000624558 1573 ntBASIC20.6■□□□□ 0.89
FOXJ3Q9UPW0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXJ3Q9UPW0 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXJ3Q9UPW0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.6■□□□□ 0.89
FOXJ3Q9UPW0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXJ3Q9UPW0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
FOXJ3Q9UPW0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FOXJ3Q9UPW0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.59■□□□□ 0.89
FOXJ3Q9UPW0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
FOXJ3Q9UPW0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXJ3Q9UPW0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXJ3Q9UPW0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FOXJ3Q9UPW0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.59■□□□□ 0.89
FOXJ3Q9UPW0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FOXJ3Q9UPW0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXJ3Q9UPW0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXJ3Q9UPW0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXJ3Q9UPW0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXJ3Q9UPW0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXJ3Q9UPW0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
FOXJ3Q9UPW0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
FOXJ3Q9UPW0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXJ3Q9UPW0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXJ3Q9UPW0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
FOXJ3Q9UPW0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.57■□□□□ 0.88
FOXJ3Q9UPW0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXJ3Q9UPW0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.57■□□□□ 0.88
FOXJ3Q9UPW0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXJ3Q9UPW0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXJ3Q9UPW0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.57■□□□□ 0.88
FOXJ3Q9UPW0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXJ3Q9UPW0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
FOXJ3Q9UPW0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXJ3Q9UPW0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXJ3Q9UPW0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
FOXJ3Q9UPW0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXJ3Q9UPW0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms