Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SSR3Q9UNL2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SSR3Q9UNL2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
SSR3Q9UNL2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SSR3Q9UNL2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SSR3Q9UNL2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SSR3Q9UNL2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.07■□□□□ 0.96
SSR3Q9UNL2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SSR3Q9UNL2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SSR3Q9UNL2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SSR3Q9UNL2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SSR3Q9UNL2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
SSR3Q9UNL2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SSR3Q9UNL2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.06■□□□□ 0.96
SSR3Q9UNL2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.06■□□□□ 0.96
SSR3Q9UNL2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SSR3Q9UNL2 SLC6A10P-202ENST00000431994 2058 ntBASIC21.06■□□□□ 0.96
SSR3Q9UNL2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SSR3Q9UNL2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SSR3Q9UNL2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SSR3Q9UNL2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SSR3Q9UNL2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SSR3Q9UNL2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SSR3Q9UNL2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SSR3Q9UNL2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SSR3Q9UNL2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.05■□□□□ 0.96
SSR3Q9UNL2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.05■□□□□ 0.96
SSR3Q9UNL2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.05■□□□□ 0.96
SSR3Q9UNL2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.05■□□□□ 0.96
SSR3Q9UNL2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SSR3Q9UNL2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SSR3Q9UNL2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.04■□□□□ 0.96
SSR3Q9UNL2 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.04■□□□□ 0.96
SSR3Q9UNL2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SSR3Q9UNL2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SSR3Q9UNL2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SSR3Q9UNL2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.04■□□□□ 0.96
SSR3Q9UNL2 CLDN5-201ENST00000403084 2357 ntBASIC21.03■□□□□ 0.96
SSR3Q9UNL2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SSR3Q9UNL2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SSR3Q9UNL2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SSR3Q9UNL2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SSR3Q9UNL2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.03■□□□□ 0.96
SSR3Q9UNL2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SSR3Q9UNL2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SSR3Q9UNL2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.03■□□□□ 0.96
SSR3Q9UNL2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SSR3Q9UNL2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR3Q9UNL2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR3Q9UNL2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR3Q9UNL2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SSR3Q9UNL2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.02■□□□□ 0.96
SSR3Q9UNL2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.02■□□□□ 0.96
SSR3Q9UNL2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR3Q9UNL2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR3Q9UNL2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SSR3Q9UNL2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SSR3Q9UNL2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSR3Q9UNL2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSR3Q9UNL2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SSR3Q9UNL2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.01■□□□□ 0.95
SSR3Q9UNL2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.01■□□□□ 0.95
SSR3Q9UNL2 SUZ12P1-203ENST00000578195 985 ntBASIC21.01■□□□□ 0.95
SSR3Q9UNL2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SSR3Q9UNL2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.01■□□□□ 0.95
SSR3Q9UNL2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21■□□□□ 0.95
SSR3Q9UNL2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SSR3Q9UNL2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
SSR3Q9UNL2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SSR3Q9UNL2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21■□□□□ 0.95
SSR3Q9UNL2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SSR3Q9UNL2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21■□□□□ 0.95
SSR3Q9UNL2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21■□□□□ 0.95
SSR3Q9UNL2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21■□□□□ 0.95
SSR3Q9UNL2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSR3Q9UNL2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSR3Q9UNL2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSR3Q9UNL2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSR3Q9UNL2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSR3Q9UNL2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSR3Q9UNL2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SSR3Q9UNL2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SSR3Q9UNL2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.99■□□□□ 0.95
SSR3Q9UNL2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SSR3Q9UNL2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SSR3Q9UNL2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SSR3Q9UNL2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSR3Q9UNL2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSR3Q9UNL2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SSR3Q9UNL2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSR3Q9UNL2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SSR3Q9UNL2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SSR3Q9UNL2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SSR3Q9UNL2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSR3Q9UNL2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSR3Q9UNL2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SSR3Q9UNL2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SSR3Q9UNL2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
SSR3Q9UNL2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SSR3Q9UNL2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms