Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 AL031848.2-201ENST00000607670 837 ntBASIC25.66■■□□□ 1.7
UBQLN1Q9UMX0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
UBQLN1Q9UMX0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.66■■□□□ 1.7
UBQLN1Q9UMX0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.66■■□□□ 1.7
UBQLN1Q9UMX0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
UBQLN1Q9UMX0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
UBQLN1Q9UMX0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
UBQLN1Q9UMX0 AL592295.1-201ENST00000400984 884 ntBASIC25.64■■□□□ 1.7
UBQLN1Q9UMX0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.64■■□□□ 1.7
UBQLN1Q9UMX0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.64■■□□□ 1.7
UBQLN1Q9UMX0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.69
UBQLN1Q9UMX0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
UBQLN1Q9UMX0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.63■■□□□ 1.69
UBQLN1Q9UMX0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.63■■□□□ 1.69
UBQLN1Q9UMX0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
UBQLN1Q9UMX0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.63■■□□□ 1.69
UBQLN1Q9UMX0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
UBQLN1Q9UMX0 AC097639.1-201ENST00000565519 1891 ntBASIC25.63■■□□□ 1.69
UBQLN1Q9UMX0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
UBQLN1Q9UMX0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
UBQLN1Q9UMX0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.62■■□□□ 1.69
UBQLN1Q9UMX0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.62■■□□□ 1.69
UBQLN1Q9UMX0 AL035685.1-201ENST00000636663 812 ntBASIC25.62■■□□□ 1.69
UBQLN1Q9UMX0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
UBQLN1Q9UMX0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
UBQLN1Q9UMX0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
UBQLN1Q9UMX0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.61■■□□□ 1.69
UBQLN1Q9UMX0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
UBQLN1Q9UMX0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
UBQLN1Q9UMX0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
UBQLN1Q9UMX0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
UBQLN1Q9UMX0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
UBQLN1Q9UMX0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
UBQLN1Q9UMX0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
UBQLN1Q9UMX0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
UBQLN1Q9UMX0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.6■■□□□ 1.69
UBQLN1Q9UMX0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
UBQLN1Q9UMX0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.6■■□□□ 1.69
UBQLN1Q9UMX0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
UBQLN1Q9UMX0 AC009299.2-201ENST00000482477 511 ntBASIC25.59■■□□□ 1.69
UBQLN1Q9UMX0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
UBQLN1Q9UMX0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
UBQLN1Q9UMX0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
UBQLN1Q9UMX0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
UBQLN1Q9UMX0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC25.58■■□□□ 1.69
UBQLN1Q9UMX0 DUSP8P4-201ENST00000399538 1761 ntBASIC25.58■■□□□ 1.69
UBQLN1Q9UMX0 AC091060.1-201ENST00000623524 1766 ntBASIC25.58■■□□□ 1.69
UBQLN1Q9UMX0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.57■■□□□ 1.68
UBQLN1Q9UMX0 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
UBQLN1Q9UMX0 KRT18P24-201ENST00000344739 1156 ntBASIC25.57■■□□□ 1.68
UBQLN1Q9UMX0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.57■■□□□ 1.68
UBQLN1Q9UMX0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.57■■□□□ 1.68
UBQLN1Q9UMX0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.57■■□□□ 1.68
UBQLN1Q9UMX0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.56■■□□□ 1.68
UBQLN1Q9UMX0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.56■■□□□ 1.68
UBQLN1Q9UMX0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.56■■□□□ 1.68
UBQLN1Q9UMX0 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
UBQLN1Q9UMX0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
UBQLN1Q9UMX0 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
UBQLN1Q9UMX0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.55■■□□□ 1.68
UBQLN1Q9UMX0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.55■■□□□ 1.68
UBQLN1Q9UMX0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
UBQLN1Q9UMX0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.55■■□□□ 1.68
UBQLN1Q9UMX0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.55■■□□□ 1.68
UBQLN1Q9UMX0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
UBQLN1Q9UMX0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
UBQLN1Q9UMX0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.55■■□□□ 1.68
UBQLN1Q9UMX0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
UBQLN1Q9UMX0 FOXO3B-201ENST00000395675 1928 ntBASIC25.55■■□□□ 1.68
UBQLN1Q9UMX0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
UBQLN1Q9UMX0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
UBQLN1Q9UMX0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
UBQLN1Q9UMX0 THA1P-201ENST00000590384 1145 ntBASIC25.54■■□□□ 1.68
UBQLN1Q9UMX0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
UBQLN1Q9UMX0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
UBQLN1Q9UMX0 AC145676.1-201ENST00000514988 2004 ntBASIC25.53■■□□□ 1.68
UBQLN1Q9UMX0 AC120024.1-201ENST00000562672 995 ntBASIC25.53■■□□□ 1.68
UBQLN1Q9UMX0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
UBQLN1Q9UMX0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.53■■□□□ 1.68
UBQLN1Q9UMX0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
UBQLN1Q9UMX0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
UBQLN1Q9UMX0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
UBQLN1Q9UMX0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
UBQLN1Q9UMX0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.52■■□□□ 1.68
UBQLN1Q9UMX0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
UBQLN1Q9UMX0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
UBQLN1Q9UMX0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC25.51■■□□□ 1.67
UBQLN1Q9UMX0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.51■■□□□ 1.67
UBQLN1Q9UMX0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.51■■□□□ 1.67
UBQLN1Q9UMX0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
UBQLN1Q9UMX0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.51■■□□□ 1.67
UBQLN1Q9UMX0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
UBQLN1Q9UMX0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
UBQLN1Q9UMX0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.5■■□□□ 1.67
UBQLN1Q9UMX0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
UBQLN1Q9UMX0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
UBQLN1Q9UMX0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
UBQLN1Q9UMX0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC25.49■■□□□ 1.67
UBQLN1Q9UMX0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
UBQLN1Q9UMX0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms