Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NUP50Q9UKX7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.45■□□□□ 0.86
NUP50Q9UKX7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NUP50Q9UKX7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NUP50Q9UKX7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NUP50Q9UKX7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.45■□□□□ 0.86
NUP50Q9UKX7 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.45■□□□□ 0.86
NUP50Q9UKX7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NUP50Q9UKX7 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.45■□□□□ 0.86
NUP50Q9UKX7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NUP50Q9UKX7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NUP50Q9UKX7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NUP50Q9UKX7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NUP50Q9UKX7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
NUP50Q9UKX7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUP50Q9UKX7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.44■□□□□ 0.86
NUP50Q9UKX7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NUP50Q9UKX7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NUP50Q9UKX7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NUP50Q9UKX7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
NUP50Q9UKX7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NUP50Q9UKX7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUP50Q9UKX7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUP50Q9UKX7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUP50Q9UKX7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUP50Q9UKX7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NUP50Q9UKX7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NUP50Q9UKX7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUP50Q9UKX7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.43■□□□□ 0.86
NUP50Q9UKX7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
NUP50Q9UKX7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.43■□□□□ 0.86
NUP50Q9UKX7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUP50Q9UKX7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NUP50Q9UKX7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUP50Q9UKX7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NUP50Q9UKX7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.42■□□□□ 0.86
NUP50Q9UKX7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NUP50Q9UKX7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NUP50Q9UKX7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUP50Q9UKX7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
NUP50Q9UKX7 AC018358.1-201ENST00000631079 1402 ntBASIC20.41■□□□□ 0.86
NUP50Q9UKX7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NUP50Q9UKX7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUP50Q9UKX7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NUP50Q9UKX7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NUP50Q9UKX7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.4■□□□□ 0.86
NUP50Q9UKX7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.4■□□□□ 0.86
NUP50Q9UKX7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.4■□□□□ 0.86
NUP50Q9UKX7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUP50Q9UKX7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NUP50Q9UKX7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NUP50Q9UKX7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.39■□□□□ 0.86
NUP50Q9UKX7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NUP50Q9UKX7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUP50Q9UKX7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUP50Q9UKX7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.39■□□□□ 0.85
NUP50Q9UKX7 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.39■□□□□ 0.85
NUP50Q9UKX7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.39■□□□□ 0.85
NUP50Q9UKX7 AL033527.3-201ENST00000566366 1196 ntBASIC20.39■□□□□ 0.85
NUP50Q9UKX7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUP50Q9UKX7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUP50Q9UKX7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUP50Q9UKX7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUP50Q9UKX7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.39■□□□□ 0.85
NUP50Q9UKX7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.39■□□□□ 0.85
NUP50Q9UKX7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUP50Q9UKX7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NUP50Q9UKX7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
NUP50Q9UKX7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
NUP50Q9UKX7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUP50Q9UKX7 AL157400.5-201ENST00000507624 621 ntBASIC20.38■□□□□ 0.85
NUP50Q9UKX7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.38■□□□□ 0.85
NUP50Q9UKX7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUP50Q9UKX7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.38■□□□□ 0.85
NUP50Q9UKX7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NUP50Q9UKX7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.38■□□□□ 0.85
NUP50Q9UKX7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NUP50Q9UKX7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUP50Q9UKX7 AP002414.2-202ENST00000590929 1450 ntBASIC20.37■□□□□ 0.85
NUP50Q9UKX7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
NUP50Q9UKX7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NUP50Q9UKX7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NUP50Q9UKX7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.37■□□□□ 0.85
NUP50Q9UKX7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUP50Q9UKX7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.37■□□□□ 0.85
NUP50Q9UKX7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.36■□□□□ 0.85
NUP50Q9UKX7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUP50Q9UKX7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUP50Q9UKX7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUP50Q9UKX7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
NUP50Q9UKX7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.36■□□□□ 0.85
NUP50Q9UKX7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUP50Q9UKX7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NUP50Q9UKX7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
NUP50Q9UKX7 AL359258.2-201ENST00000564063 1566 ntBASIC20.35■□□□□ 0.85
NUP50Q9UKX7 KRT18P60-201ENST00000312876 1297 ntBASIC20.35■□□□□ 0.85
NUP50Q9UKX7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUP50Q9UKX7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUP50Q9UKX7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.35■□□□□ 0.85
NUP50Q9UKX7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms