Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
UBQLN2Q9UHD9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.86■□□□□ 0.77
UBQLN2Q9UHD9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
UBQLN2Q9UHD9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN2Q9UHD9 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN2Q9UHD9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
UBQLN2Q9UHD9 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN2Q9UHD9 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN2Q9UHD9 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN2Q9UHD9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN2Q9UHD9 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBQLN2Q9UHD9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN2Q9UHD9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.85■□□□□ 0.77
UBQLN2Q9UHD9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN2Q9UHD9 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN2Q9UHD9 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBQLN2Q9UHD9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBQLN2Q9UHD9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBQLN2Q9UHD9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.84■□□□□ 0.77
UBQLN2Q9UHD9 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBQLN2Q9UHD9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
UBQLN2Q9UHD9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.84■□□□□ 0.77
UBQLN2Q9UHD9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBQLN2Q9UHD9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
UBQLN2Q9UHD9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
UBQLN2Q9UHD9 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
UBQLN2Q9UHD9 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
UBQLN2Q9UHD9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBQLN2Q9UHD9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBQLN2Q9UHD9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
UBQLN2Q9UHD9 AC127502.1-201ENST00000399971 1502 ntBASIC19.83■□□□□ 0.77
UBQLN2Q9UHD9 SLC25A24-204ENST00000569674 2357 ntBASIC19.83■□□□□ 0.77
UBQLN2Q9UHD9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
UBQLN2Q9UHD9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBQLN2Q9UHD9 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.83■□□□□ 0.76
UBQLN2Q9UHD9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBQLN2Q9UHD9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.83■□□□□ 0.76
UBQLN2Q9UHD9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBQLN2Q9UHD9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
UBQLN2Q9UHD9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBQLN2Q9UHD9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.82■□□□□ 0.76
UBQLN2Q9UHD9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBQLN2Q9UHD9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBQLN2Q9UHD9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBQLN2Q9UHD9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBQLN2Q9UHD9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.82■□□□□ 0.76
UBQLN2Q9UHD9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBQLN2Q9UHD9 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.82■□□□□ 0.76
UBQLN2Q9UHD9 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBQLN2Q9UHD9 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBQLN2Q9UHD9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.81■□□□□ 0.76
UBQLN2Q9UHD9 AC087741.3-201ENST00000624270 1347 ntBASIC19.81■□□□□ 0.76
UBQLN2Q9UHD9 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBQLN2Q9UHD9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.81■□□□□ 0.76
UBQLN2Q9UHD9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.81■□□□□ 0.76
UBQLN2Q9UHD9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
UBQLN2Q9UHD9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.81■□□□□ 0.76
UBQLN2Q9UHD9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
UBQLN2Q9UHD9 C9orf163-202ENST00000624034 2573 ntBASIC19.8■□□□□ 0.76
UBQLN2Q9UHD9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
UBQLN2Q9UHD9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.8■□□□□ 0.76
UBQLN2Q9UHD9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBQLN2Q9UHD9 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBQLN2Q9UHD9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBQLN2Q9UHD9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBQLN2Q9UHD9 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBQLN2Q9UHD9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBQLN2Q9UHD9 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBQLN2Q9UHD9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.79■□□□□ 0.76
UBQLN2Q9UHD9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBQLN2Q9UHD9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBQLN2Q9UHD9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBQLN2Q9UHD9 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBQLN2Q9UHD9 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.79■□□□□ 0.76
UBQLN2Q9UHD9 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBQLN2Q9UHD9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
UBQLN2Q9UHD9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.79■□□□□ 0.76
UBQLN2Q9UHD9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN2Q9UHD9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN2Q9UHD9 C1orf229-201ENST00000623686 2258 ntBASIC19.78■□□□□ 0.76
UBQLN2Q9UHD9 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.78■□□□□ 0.76
UBQLN2Q9UHD9 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
UBQLN2Q9UHD9 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN2Q9UHD9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN2Q9UHD9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN2Q9UHD9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN2Q9UHD9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
UBQLN2Q9UHD9 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.78■□□□□ 0.76
UBQLN2Q9UHD9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBQLN2Q9UHD9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
UBQLN2Q9UHD9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN2Q9UHD9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN2Q9UHD9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN2Q9UHD9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN2Q9UHD9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN2Q9UHD9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
UBQLN2Q9UHD9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN2Q9UHD9 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN2Q9UHD9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBQLN2Q9UHD9 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms