Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.81■■□□□ 1.08
LRFN1Q9P244 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.81■■□□□ 1.08
LRFN1Q9P244 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRFN1Q9P244 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.81■■□□□ 1.08
LRFN1Q9P244 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.81■■□□□ 1.08
LRFN1Q9P244 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.81■■□□□ 1.08
LRFN1Q9P244 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LRFN1Q9P244 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRFN1Q9P244 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LRFN1Q9P244 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRFN1Q9P244 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRFN1Q9P244 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRFN1Q9P244 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.8■■□□□ 1.08
LRFN1Q9P244 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
LRFN1Q9P244 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
LRFN1Q9P244 AC120024.1-201ENST00000562672 995 ntBASIC21.8■■□□□ 1.08
LRFN1Q9P244 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRFN1Q9P244 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRFN1Q9P244 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
LRFN1Q9P244 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.8■■□□□ 1.08
LRFN1Q9P244 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRFN1Q9P244 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
LRFN1Q9P244 BX664725.1-201ENST00000438252 379 ntBASIC21.79■■□□□ 1.08
LRFN1Q9P244 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.79■■□□□ 1.08
LRFN1Q9P244 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.79■■□□□ 1.08
LRFN1Q9P244 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRFN1Q9P244 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRFN1Q9P244 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.78■■□□□ 1.08
LRFN1Q9P244 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
LRFN1Q9P244 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRFN1Q9P244 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRFN1Q9P244 KRT125P-201ENST00000546827 989 ntBASIC21.78■■□□□ 1.08
LRFN1Q9P244 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
LRFN1Q9P244 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRFN1Q9P244 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.78■■□□□ 1.08
LRFN1Q9P244 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRFN1Q9P244 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
LRFN1Q9P244 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LRFN1Q9P244 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRFN1Q9P244 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LRFN1Q9P244 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.77■■□□□ 1.08
LRFN1Q9P244 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.77■■□□□ 1.08
LRFN1Q9P244 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.76■■□□□ 1.07
LRFN1Q9P244 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRFN1Q9P244 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRFN1Q9P244 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRFN1Q9P244 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRFN1Q9P244 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRFN1Q9P244 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.76■■□□□ 1.07
LRFN1Q9P244 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRFN1Q9P244 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRFN1Q9P244 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRFN1Q9P244 AL121749.1-202ENST00000609313 2153 ntBASIC21.75■■□□□ 1.07
LRFN1Q9P244 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRFN1Q9P244 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
LRFN1Q9P244 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
LRFN1Q9P244 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.75■■□□□ 1.07
LRFN1Q9P244 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LRFN1Q9P244 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRFN1Q9P244 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRFN1Q9P244 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRFN1Q9P244 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRFN1Q9P244 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.74■■□□□ 1.07
LRFN1Q9P244 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LRFN1Q9P244 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LRFN1Q9P244 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRFN1Q9P244 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
LRFN1Q9P244 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.74■■□□□ 1.07
LRFN1Q9P244 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRFN1Q9P244 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRFN1Q9P244 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
LRFN1Q9P244 ERN1-208ENST00000606895 2068 ntBASIC21.73■■□□□ 1.07
LRFN1Q9P244 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRFN1Q9P244 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LRFN1Q9P244 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRFN1Q9P244 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LRFN1Q9P244 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.73■■□□□ 1.07
LRFN1Q9P244 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRFN1Q9P244 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LRFN1Q9P244 AC137630.3-201ENST00000607245 391 ntBASIC21.72■■□□□ 1.07
LRFN1Q9P244 MIR4787-201ENST00000607364 84 ntBASIC21.72■■□□□ 1.07
LRFN1Q9P244 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.72■■□□□ 1.07
LRFN1Q9P244 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.72■■□□□ 1.07
LRFN1Q9P244 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.72■■□□□ 1.07
LRFN1Q9P244 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRFN1Q9P244 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LRFN1Q9P244 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.71■■□□□ 1.07
LRFN1Q9P244 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRFN1Q9P244 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.71■■□□□ 1.07
LRFN1Q9P244 AC131212.1-201ENST00000613771 668 ntBASIC21.71■■□□□ 1.07
LRFN1Q9P244 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRFN1Q9P244 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRFN1Q9P244 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.7■■□□□ 1.06
LRFN1Q9P244 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRFN1Q9P244 AL356441.2-201ENST00000443009 864 ntBASIC21.7■■□□□ 1.06
LRFN1Q9P244 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
LRFN1Q9P244 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.7■■□□□ 1.06
LRFN1Q9P244 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRFN1Q9P244 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRFN1Q9P244 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms