Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
VRTNQ9H8Y1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
VRTNQ9H8Y1 AC010980.1-201ENST00000587192 1142 ntBASIC25.47■■□□□ 1.67
VRTNQ9H8Y1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.47■■□□□ 1.67
VRTNQ9H8Y1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
VRTNQ9H8Y1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
VRTNQ9H8Y1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
VRTNQ9H8Y1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
VRTNQ9H8Y1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.46■■□□□ 1.67
VRTNQ9H8Y1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
VRTNQ9H8Y1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
VRTNQ9H8Y1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
VRTNQ9H8Y1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
VRTNQ9H8Y1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
VRTNQ9H8Y1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.45■■□□□ 1.66
VRTNQ9H8Y1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
VRTNQ9H8Y1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
VRTNQ9H8Y1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.45■■□□□ 1.66
VRTNQ9H8Y1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.45■■□□□ 1.66
VRTNQ9H8Y1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.44■■□□□ 1.66
VRTNQ9H8Y1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
VRTNQ9H8Y1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.44■■□□□ 1.66
VRTNQ9H8Y1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.44■■□□□ 1.66
VRTNQ9H8Y1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.44■■□□□ 1.66
VRTNQ9H8Y1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
VRTNQ9H8Y1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
VRTNQ9H8Y1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
VRTNQ9H8Y1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
VRTNQ9H8Y1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
VRTNQ9H8Y1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
VRTNQ9H8Y1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
VRTNQ9H8Y1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
VRTNQ9H8Y1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.41■■□□□ 1.66
VRTNQ9H8Y1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.41■■□□□ 1.66
VRTNQ9H8Y1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
VRTNQ9H8Y1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
VRTNQ9H8Y1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
VRTNQ9H8Y1 FOXO3B-201ENST00000395675 1928 ntBASIC25.4■■□□□ 1.66
VRTNQ9H8Y1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
VRTNQ9H8Y1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
VRTNQ9H8Y1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.4■■□□□ 1.66
VRTNQ9H8Y1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
VRTNQ9H8Y1 AC022616.5-201ENST00000518796 181 ntBASIC25.4■■□□□ 1.66
VRTNQ9H8Y1 MIR4508-201ENST00000584178 70 ntBASIC25.4■■□□□ 1.66
VRTNQ9H8Y1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
VRTNQ9H8Y1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
VRTNQ9H8Y1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.4■■□□□ 1.66
VRTNQ9H8Y1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.39■■□□□ 1.65
VRTNQ9H8Y1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.39■■□□□ 1.65
VRTNQ9H8Y1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
VRTNQ9H8Y1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
VRTNQ9H8Y1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
VRTNQ9H8Y1 AL592295.1-201ENST00000400984 884 ntBASIC25.38■■□□□ 1.65
VRTNQ9H8Y1 AC103834.1-201ENST00000520383 144 ntBASIC25.38■■□□□ 1.65
VRTNQ9H8Y1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
VRTNQ9H8Y1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
VRTNQ9H8Y1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.37■■□□□ 1.65
VRTNQ9H8Y1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
VRTNQ9H8Y1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
VRTNQ9H8Y1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
VRTNQ9H8Y1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
VRTNQ9H8Y1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
VRTNQ9H8Y1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.37■■□□□ 1.65
VRTNQ9H8Y1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
VRTNQ9H8Y1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
VRTNQ9H8Y1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.37■■□□□ 1.65
VRTNQ9H8Y1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.37■■□□□ 1.65
VRTNQ9H8Y1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.37■■□□□ 1.65
VRTNQ9H8Y1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
VRTNQ9H8Y1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
VRTNQ9H8Y1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
VRTNQ9H8Y1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.36■■□□□ 1.65
VRTNQ9H8Y1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.36■■□□□ 1.65
VRTNQ9H8Y1 SLC6A10P-202ENST00000431994 2058 ntBASIC25.36■■□□□ 1.65
VRTNQ9H8Y1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
VRTNQ9H8Y1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.36■■□□□ 1.65
VRTNQ9H8Y1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
VRTNQ9H8Y1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
VRTNQ9H8Y1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
VRTNQ9H8Y1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
VRTNQ9H8Y1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
VRTNQ9H8Y1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
VRTNQ9H8Y1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
VRTNQ9H8Y1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
VRTNQ9H8Y1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
VRTNQ9H8Y1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.34■■□□□ 1.65
VRTNQ9H8Y1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.34■■□□□ 1.65
VRTNQ9H8Y1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.34■■□□□ 1.65
VRTNQ9H8Y1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
VRTNQ9H8Y1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.34■■□□□ 1.65
VRTNQ9H8Y1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
VRTNQ9H8Y1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.33■■□□□ 1.65
VRTNQ9H8Y1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
VRTNQ9H8Y1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.33■■□□□ 1.64
VRTNQ9H8Y1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.32■■□□□ 1.64
VRTNQ9H8Y1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
VRTNQ9H8Y1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
VRTNQ9H8Y1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
VRTNQ9H8Y1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
VRTNQ9H8Y1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms