Protein–RNA interactions for Protein: Q99941

ATF6B, Cyclic AMP-dependent transcription factor ATF-6 beta, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF6BQ99941 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATF6BQ99941 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATF6BQ99941 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.19■□□□□ 0.98
ATF6BQ99941 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATF6BQ99941 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.18■□□□□ 0.98
ATF6BQ99941 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATF6BQ99941 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.18■□□□□ 0.98
ATF6BQ99941 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATF6BQ99941 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.18■□□□□ 0.98
ATF6BQ99941 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATF6BQ99941 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATF6BQ99941 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATF6BQ99941 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.17■□□□□ 0.98
ATF6BQ99941 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATF6BQ99941 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATF6BQ99941 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATF6BQ99941 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATF6BQ99941 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATF6BQ99941 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATF6BQ99941 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.16■□□□□ 0.98
ATF6BQ99941 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.16■□□□□ 0.98
ATF6BQ99941 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.16■□□□□ 0.98
ATF6BQ99941 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATF6BQ99941 AC068473.5-201ENST00000616428 2072 ntBASIC21.16■□□□□ 0.98
ATF6BQ99941 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.15■□□□□ 0.98
ATF6BQ99941 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
ATF6BQ99941 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATF6BQ99941 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATF6BQ99941 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATF6BQ99941 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATF6BQ99941 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATF6BQ99941 MIR4449-201ENST00000578365 66 ntBASIC21.15■□□□□ 0.98
ATF6BQ99941 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.15■□□□□ 0.98
ATF6BQ99941 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATF6BQ99941 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATF6BQ99941 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATF6BQ99941 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATF6BQ99941 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ATF6BQ99941 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
ATF6BQ99941 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATF6BQ99941 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATF6BQ99941 AC092296.2-201ENST00000589470 999 ntBASIC21.14■□□□□ 0.97
ATF6BQ99941 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATF6BQ99941 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATF6BQ99941 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATF6BQ99941 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATF6BQ99941 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
ATF6BQ99941 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATF6BQ99941 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATF6BQ99941 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
ATF6BQ99941 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.13■□□□□ 0.97
ATF6BQ99941 AC025884.2-201ENST00000553429 711 ntBASIC21.13■□□□□ 0.97
ATF6BQ99941 AC022413.1-201ENST00000624602 984 ntBASIC21.13■□□□□ 0.97
ATF6BQ99941 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATF6BQ99941 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATF6BQ99941 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
ATF6BQ99941 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATF6BQ99941 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ATF6BQ99941 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATF6BQ99941 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ATF6BQ99941 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATF6BQ99941 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATF6BQ99941 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATF6BQ99941 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.12■□□□□ 0.97
ATF6BQ99941 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATF6BQ99941 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.12■□□□□ 0.97
ATF6BQ99941 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
ATF6BQ99941 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.12■□□□□ 0.97
ATF6BQ99941 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATF6BQ99941 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATF6BQ99941 MIR3960-201ENST00000583311 91 ntBASIC21.11■□□□□ 0.97
ATF6BQ99941 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.11■□□□□ 0.97
ATF6BQ99941 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATF6BQ99941 LINC01124-201ENST00000409786 2117 ntBASIC21.11■□□□□ 0.97
ATF6BQ99941 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
ATF6BQ99941 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.1■□□□□ 0.97
ATF6BQ99941 SMPD5-203ENST00000639008 1464 ntBASIC21.1■□□□□ 0.97
ATF6BQ99941 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATF6BQ99941 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.1■□□□□ 0.97
ATF6BQ99941 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATF6BQ99941 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ATF6BQ99941 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATF6BQ99941 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATF6BQ99941 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
ATF6BQ99941 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.09■□□□□ 0.97
ATF6BQ99941 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATF6BQ99941 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
ATF6BQ99941 AC096887.2-201ENST00000623443 1957 ntBASIC21.09■□□□□ 0.97
ATF6BQ99941 ECEL1P2-201ENST00000461596 1295 ntBASIC21.09■□□□□ 0.97
ATF6BQ99941 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ATF6BQ99941 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATF6BQ99941 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATF6BQ99941 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.09■□□□□ 0.97
ATF6BQ99941 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATF6BQ99941 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.09■□□□□ 0.97
ATF6BQ99941 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATF6BQ99941 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.08■□□□□ 0.97
ATF6BQ99941 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
ATF6BQ99941 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.08■□□□□ 0.97
ATF6BQ99941 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms