Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
DUX3Q96PT4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
DUX3Q96PT4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
DUX3Q96PT4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DUX3Q96PT4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
DUX3Q96PT4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.39■□□□□ 0.53
DUX3Q96PT4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DUX3Q96PT4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
DUX3Q96PT4 KRT18P10-201ENST00000388836 1287 ntBASIC18.39■□□□□ 0.53
DUX3Q96PT4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DUX3Q96PT4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DUX3Q96PT4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
DUX3Q96PT4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
DUX3Q96PT4 AL121749.1-202ENST00000609313 2153 ntBASIC18.38■□□□□ 0.53
DUX3Q96PT4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
DUX3Q96PT4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
DUX3Q96PT4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.38■□□□□ 0.53
DUX3Q96PT4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
DUX3Q96PT4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.38■□□□□ 0.53
DUX3Q96PT4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.38■□□□□ 0.53
DUX3Q96PT4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DUX3Q96PT4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
DUX3Q96PT4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DUX3Q96PT4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DUX3Q96PT4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DUX3Q96PT4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DUX3Q96PT4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DUX3Q96PT4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.38■□□□□ 0.53
DUX3Q96PT4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DUX3Q96PT4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
DUX3Q96PT4 ERN1-208ENST00000606895 2068 ntBASIC18.37■□□□□ 0.53
DUX3Q96PT4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DUX3Q96PT4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DUX3Q96PT4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
DUX3Q96PT4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.37■□□□□ 0.53
DUX3Q96PT4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
DUX3Q96PT4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DUX3Q96PT4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
DUX3Q96PT4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DUX3Q96PT4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DUX3Q96PT4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
DUX3Q96PT4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DUX3Q96PT4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DUX3Q96PT4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DUX3Q96PT4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
DUX3Q96PT4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
DUX3Q96PT4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DUX3Q96PT4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
DUX3Q96PT4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DUX3Q96PT4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DUX3Q96PT4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.35■□□□□ 0.53
DUX3Q96PT4 AC239859.2-201ENST00000444165 318 ntBASIC18.35■□□□□ 0.53
DUX3Q96PT4 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.35■□□□□ 0.53
DUX3Q96PT4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DUX3Q96PT4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.35■□□□□ 0.53
DUX3Q96PT4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DUX3Q96PT4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.35■□□□□ 0.53
DUX3Q96PT4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUX3Q96PT4 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.34■□□□□ 0.53
DUX3Q96PT4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.34■□□□□ 0.53
DUX3Q96PT4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DUX3Q96PT4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
DUX3Q96PT4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.33■□□□□ 0.53
DUX3Q96PT4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
DUX3Q96PT4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.53
DUX3Q96PT4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
DUX3Q96PT4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DUX3Q96PT4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
DUX3Q96PT4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
DUX3Q96PT4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
DUX3Q96PT4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.33■□□□□ 0.52
DUX3Q96PT4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.33■□□□□ 0.52
DUX3Q96PT4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
DUX3Q96PT4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DUX3Q96PT4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DUX3Q96PT4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.32■□□□□ 0.52
DUX3Q96PT4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.32■□□□□ 0.52
DUX3Q96PT4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DUX3Q96PT4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DUX3Q96PT4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DUX3Q96PT4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
DUX3Q96PT4 THA1P-201ENST00000590384 1145 ntBASIC18.31■□□□□ 0.52
DUX3Q96PT4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DUX3Q96PT4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.31■□□□□ 0.52
DUX3Q96PT4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
DUX3Q96PT4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DUX3Q96PT4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.31■□□□□ 0.52
DUX3Q96PT4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DUX3Q96PT4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.3■□□□□ 0.52
DUX3Q96PT4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DUX3Q96PT4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DUX3Q96PT4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DUX3Q96PT4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DUX3Q96PT4 GUSBP5-201ENST00000418136 578 ntBASIC18.3■□□□□ 0.52
DUX3Q96PT4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.3■□□□□ 0.52
DUX3Q96PT4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DUX3Q96PT4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DUX3Q96PT4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DUX3Q96PT4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DUX3Q96PT4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms