Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF48Q96MX3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.33■□□□□ 0.68
ZNF48Q96MX3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.33■□□□□ 0.68
ZNF48Q96MX3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
ZNF48Q96MX3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF48Q96MX3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.68
ZNF48Q96MX3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.33■□□□□ 0.68
ZNF48Q96MX3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF48Q96MX3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
ZNF48Q96MX3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF48Q96MX3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF48Q96MX3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF48Q96MX3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF48Q96MX3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF48Q96MX3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF48Q96MX3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.32■□□□□ 0.68
ZNF48Q96MX3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF48Q96MX3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF48Q96MX3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF48Q96MX3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.31■□□□□ 0.68
ZNF48Q96MX3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF48Q96MX3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ZNF48Q96MX3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF48Q96MX3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF48Q96MX3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF48Q96MX3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF48Q96MX3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.3■□□□□ 0.68
ZNF48Q96MX3 KRT18P24-201ENST00000344739 1156 ntBASIC19.3■□□□□ 0.68
ZNF48Q96MX3 MIR4787-201ENST00000607364 84 ntBASIC19.3■□□□□ 0.68
ZNF48Q96MX3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.3■□□□□ 0.68
ZNF48Q96MX3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF48Q96MX3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.29■□□□□ 0.68
ZNF48Q96MX3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.29■□□□□ 0.68
ZNF48Q96MX3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF48Q96MX3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF48Q96MX3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ZNF48Q96MX3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF48Q96MX3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ZNF48Q96MX3 BX664725.1-201ENST00000438252 379 ntBASIC19.29■□□□□ 0.68
ZNF48Q96MX3 KRT125P-201ENST00000546827 989 ntBASIC19.29■□□□□ 0.68
ZNF48Q96MX3 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.29■□□□□ 0.68
ZNF48Q96MX3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF48Q96MX3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.29■□□□□ 0.68
ZNF48Q96MX3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.29■□□□□ 0.68
ZNF48Q96MX3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF48Q96MX3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF48Q96MX3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF48Q96MX3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF48Q96MX3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF48Q96MX3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF48Q96MX3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF48Q96MX3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF48Q96MX3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF48Q96MX3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF48Q96MX3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF48Q96MX3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
ZNF48Q96MX3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
ZNF48Q96MX3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF48Q96MX3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF48Q96MX3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.27■□□□□ 0.68
ZNF48Q96MX3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.27■□□□□ 0.68
ZNF48Q96MX3 AC120024.1-201ENST00000562672 995 ntBASIC19.27■□□□□ 0.68
ZNF48Q96MX3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ZNF48Q96MX3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ZNF48Q96MX3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF48Q96MX3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.27■□□□□ 0.68
ZNF48Q96MX3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.27■□□□□ 0.67
ZNF48Q96MX3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF48Q96MX3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF48Q96MX3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF48Q96MX3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.26■□□□□ 0.67
ZNF48Q96MX3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF48Q96MX3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF48Q96MX3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF48Q96MX3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF48Q96MX3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.26■□□□□ 0.67
ZNF48Q96MX3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF48Q96MX3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF48Q96MX3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF48Q96MX3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.25■□□□□ 0.67
ZNF48Q96MX3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF48Q96MX3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF48Q96MX3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF48Q96MX3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF48Q96MX3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF48Q96MX3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.25■□□□□ 0.67
ZNF48Q96MX3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF48Q96MX3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF48Q96MX3 UNC93B8-201ENST00000511903 705 ntBASIC19.25■□□□□ 0.67
ZNF48Q96MX3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.25■□□□□ 0.67
ZNF48Q96MX3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF48Q96MX3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF48Q96MX3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF48Q96MX3 AC091060.1-201ENST00000623524 1766 ntBASIC19.24■□□□□ 0.67
ZNF48Q96MX3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.24■□□□□ 0.67
ZNF48Q96MX3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ZNF48Q96MX3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF48Q96MX3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.24■□□□□ 0.67
ZNF48Q96MX3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF48Q96MX3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms