Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
SNIP1Q8TAD8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SNIP1Q8TAD8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SNIP1Q8TAD8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SNIP1Q8TAD8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.53■■□□□ 1.2
SNIP1Q8TAD8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.52■■□□□ 1.2
SNIP1Q8TAD8 MIR5787-201ENST00000611784 55 ntBASIC22.52■■□□□ 1.2
SNIP1Q8TAD8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
SNIP1Q8TAD8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.52■■□□□ 1.2
SNIP1Q8TAD8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SNIP1Q8TAD8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.51■■□□□ 1.19
SNIP1Q8TAD8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SNIP1Q8TAD8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.51■■□□□ 1.19
SNIP1Q8TAD8 PBX2P1-201ENST00000493219 1291 ntBASIC22.51■■□□□ 1.19
SNIP1Q8TAD8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.51■■□□□ 1.19
SNIP1Q8TAD8 AC011551.1-201ENST00000614101 683 ntBASIC22.51■■□□□ 1.19
SNIP1Q8TAD8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.51■■□□□ 1.19
SNIP1Q8TAD8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.51■■□□□ 1.19
SNIP1Q8TAD8 AC135279.3-201ENST00000610945 1311 ntBASIC22.51■■□□□ 1.19
SNIP1Q8TAD8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
SNIP1Q8TAD8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
SNIP1Q8TAD8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.5■■□□□ 1.19
SNIP1Q8TAD8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SNIP1Q8TAD8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SNIP1Q8TAD8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SNIP1Q8TAD8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SNIP1Q8TAD8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
SNIP1Q8TAD8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SNIP1Q8TAD8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SNIP1Q8TAD8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.49■■□□□ 1.19
SNIP1Q8TAD8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
SNIP1Q8TAD8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
SNIP1Q8TAD8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SNIP1Q8TAD8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SNIP1Q8TAD8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SNIP1Q8TAD8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.48■■□□□ 1.19
SNIP1Q8TAD8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.48■■□□□ 1.19
SNIP1Q8TAD8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.48■■□□□ 1.19
SNIP1Q8TAD8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SNIP1Q8TAD8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.48■■□□□ 1.19
SNIP1Q8TAD8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SNIP1Q8TAD8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SNIP1Q8TAD8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.47■■□□□ 1.19
SNIP1Q8TAD8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SNIP1Q8TAD8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.47■■□□□ 1.19
SNIP1Q8TAD8 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.47■■□□□ 1.19
SNIP1Q8TAD8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
SNIP1Q8TAD8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
SNIP1Q8TAD8 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.46■■□□□ 1.19
SNIP1Q8TAD8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
SNIP1Q8TAD8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.46■■□□□ 1.19
SNIP1Q8TAD8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SNIP1Q8TAD8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
SNIP1Q8TAD8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
SNIP1Q8TAD8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.19
SNIP1Q8TAD8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
SNIP1Q8TAD8 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.45■■□□□ 1.18
SNIP1Q8TAD8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.45■■□□□ 1.18
SNIP1Q8TAD8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SNIP1Q8TAD8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SNIP1Q8TAD8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SNIP1Q8TAD8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
SNIP1Q8TAD8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.44■■□□□ 1.18
SNIP1Q8TAD8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SNIP1Q8TAD8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.44■■□□□ 1.18
SNIP1Q8TAD8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
SNIP1Q8TAD8 SUDS3P1-201ENST00000505831 966 ntBASIC22.44■■□□□ 1.18
SNIP1Q8TAD8 AL031432.3-201ENST00000607698 485 ntBASIC22.44■■□□□ 1.18
SNIP1Q8TAD8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.44■■□□□ 1.18
SNIP1Q8TAD8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SNIP1Q8TAD8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.43■■□□□ 1.18
SNIP1Q8TAD8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SNIP1Q8TAD8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.43■■□□□ 1.18
SNIP1Q8TAD8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SNIP1Q8TAD8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.43■■□□□ 1.18
SNIP1Q8TAD8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.43■■□□□ 1.18
SNIP1Q8TAD8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SNIP1Q8TAD8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SNIP1Q8TAD8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SNIP1Q8TAD8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SNIP1Q8TAD8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SNIP1Q8TAD8 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SNIP1Q8TAD8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SNIP1Q8TAD8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.42■■□□□ 1.18
SNIP1Q8TAD8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.42■■□□□ 1.18
SNIP1Q8TAD8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.42■■□□□ 1.18
SNIP1Q8TAD8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SNIP1Q8TAD8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SNIP1Q8TAD8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SNIP1Q8TAD8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SNIP1Q8TAD8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SNIP1Q8TAD8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.41■■□□□ 1.18
SNIP1Q8TAD8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.41■■□□□ 1.18
SNIP1Q8TAD8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SNIP1Q8TAD8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
SNIP1Q8TAD8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SNIP1Q8TAD8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.4■■□□□ 1.18
SNIP1Q8TAD8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.4■■□□□ 1.18
SNIP1Q8TAD8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.18
SNIP1Q8TAD8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms