Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF439Q8NDP4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF439Q8NDP4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF439Q8NDP4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.55■□□□□ 0.72
ZNF439Q8NDP4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF439Q8NDP4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF439Q8NDP4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF439Q8NDP4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ZNF439Q8NDP4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
ZNF439Q8NDP4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF439Q8NDP4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF439Q8NDP4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF439Q8NDP4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF439Q8NDP4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.53■□□□□ 0.72
ZNF439Q8NDP4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ZNF439Q8NDP4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF439Q8NDP4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.53■□□□□ 0.72
ZNF439Q8NDP4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF439Q8NDP4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF439Q8NDP4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF439Q8NDP4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF439Q8NDP4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF439Q8NDP4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.53■□□□□ 0.72
ZNF439Q8NDP4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF439Q8NDP4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF439Q8NDP4 AC142381.3-201ENST00000568208 1670 ntBASIC19.52■□□□□ 0.72
ZNF439Q8NDP4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF439Q8NDP4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.52■□□□□ 0.72
ZNF439Q8NDP4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF439Q8NDP4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
ZNF439Q8NDP4 AC009831.1-201ENST00000580420 1582 ntBASIC19.52■□□□□ 0.71
ZNF439Q8NDP4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
ZNF439Q8NDP4 AC022211.4-201ENST00000625094 2161 ntBASIC19.51■□□□□ 0.71
ZNF439Q8NDP4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF439Q8NDP4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF439Q8NDP4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF439Q8NDP4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
ZNF439Q8NDP4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF439Q8NDP4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF439Q8NDP4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF439Q8NDP4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF439Q8NDP4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF439Q8NDP4 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.5■□□□□ 0.71
ZNF439Q8NDP4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF439Q8NDP4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.5■□□□□ 0.71
ZNF439Q8NDP4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF439Q8NDP4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF439Q8NDP4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF439Q8NDP4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF439Q8NDP4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF439Q8NDP4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF439Q8NDP4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF439Q8NDP4 HSD17B1P1-201ENST00000590052 955 ntBASIC19.49■□□□□ 0.71
ZNF439Q8NDP4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF439Q8NDP4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.49■□□□□ 0.71
ZNF439Q8NDP4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF439Q8NDP4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF439Q8NDP4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF439Q8NDP4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF439Q8NDP4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF439Q8NDP4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ZNF439Q8NDP4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ZNF439Q8NDP4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.48■□□□□ 0.71
ZNF439Q8NDP4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF439Q8NDP4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF439Q8NDP4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF439Q8NDP4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF439Q8NDP4 SLC6A10P-202ENST00000431994 2058 ntBASIC19.47■□□□□ 0.71
ZNF439Q8NDP4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF439Q8NDP4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF439Q8NDP4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF439Q8NDP4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF439Q8NDP4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF439Q8NDP4 AC133552.2-201ENST00000619106 1032 ntBASIC19.47■□□□□ 0.71
ZNF439Q8NDP4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF439Q8NDP4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF439Q8NDP4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF439Q8NDP4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF439Q8NDP4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF439Q8NDP4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNF439Q8NDP4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF439Q8NDP4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF439Q8NDP4 RARRES2P2-201ENST00000394842 485 ntBASIC19.46■□□□□ 0.71
ZNF439Q8NDP4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.46■□□□□ 0.71
ZNF439Q8NDP4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF439Q8NDP4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF439Q8NDP4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF439Q8NDP4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF439Q8NDP4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ZNF439Q8NDP4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF439Q8NDP4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ZNF439Q8NDP4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF439Q8NDP4 AC138932.3-201ENST00000567634 1902 ntBASIC19.45■□□□□ 0.7
ZNF439Q8NDP4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
ZNF439Q8NDP4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ZNF439Q8NDP4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF439Q8NDP4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF439Q8NDP4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF439Q8NDP4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF439Q8NDP4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms