Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC168Q8NDH2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC168Q8NDH2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC168Q8NDH2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC168Q8NDH2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC168Q8NDH2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC168Q8NDH2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CCDC168Q8NDH2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CCDC168Q8NDH2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC168Q8NDH2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC168Q8NDH2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC168Q8NDH2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC168Q8NDH2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC168Q8NDH2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC168Q8NDH2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC168Q8NDH2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC168Q8NDH2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC168Q8NDH2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC168Q8NDH2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC168Q8NDH2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC168Q8NDH2 AP001330.3-201ENST00000520123 633 ntBASIC20.19■□□□□ 0.82
CCDC168Q8NDH2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC168Q8NDH2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC168Q8NDH2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC168Q8NDH2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCDC168Q8NDH2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CCDC168Q8NDH2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC168Q8NDH2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC168Q8NDH2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC168Q8NDH2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC168Q8NDH2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC168Q8NDH2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC168Q8NDH2 AL136162.1-201ENST00000607711 1078 ntBASIC20.18■□□□□ 0.82
CCDC168Q8NDH2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC168Q8NDH2 AC011551.1-201ENST00000614101 683 ntBASIC20.17■□□□□ 0.82
CCDC168Q8NDH2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC168Q8NDH2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CCDC168Q8NDH2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC168Q8NDH2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.17■□□□□ 0.82
CCDC168Q8NDH2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC168Q8NDH2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC168Q8NDH2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC168Q8NDH2 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC168Q8NDH2 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.16■□□□□ 0.82
CCDC168Q8NDH2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC168Q8NDH2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC168Q8NDH2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC168Q8NDH2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CCDC168Q8NDH2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.16■□□□□ 0.82
CCDC168Q8NDH2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC168Q8NDH2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC168Q8NDH2 RASA4CP-201ENST00000424092 1398 ntBASIC20.15■□□□□ 0.82
CCDC168Q8NDH2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CCDC168Q8NDH2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCDC168Q8NDH2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CCDC168Q8NDH2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC168Q8NDH2 AC091305.1-201ENST00000479476 895 ntBASIC20.15■□□□□ 0.82
CCDC168Q8NDH2 AL136967.2-201ENST00000623968 743 ntBASIC20.15■□□□□ 0.82
CCDC168Q8NDH2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC168Q8NDH2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC168Q8NDH2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCDC168Q8NDH2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CCDC168Q8NDH2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.14■□□□□ 0.81
CCDC168Q8NDH2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC168Q8NDH2 AC034268.1-201ENST00000441047 882 ntBASIC20.13■□□□□ 0.81
CCDC168Q8NDH2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CCDC168Q8NDH2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.13■□□□□ 0.81
CCDC168Q8NDH2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC168Q8NDH2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC168Q8NDH2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CCDC168Q8NDH2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC168Q8NDH2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.12■□□□□ 0.81
CCDC168Q8NDH2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.12■□□□□ 0.81
CCDC168Q8NDH2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC168Q8NDH2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC168Q8NDH2 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.11■□□□□ 0.81
CCDC168Q8NDH2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC168Q8NDH2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC168Q8NDH2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC168Q8NDH2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC168Q8NDH2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC168Q8NDH2 ID1-201ENST00000376105 1233 ntBASIC20.1■□□□□ 0.81
CCDC168Q8NDH2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC168Q8NDH2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC168Q8NDH2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC168Q8NDH2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC168Q8NDH2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC168Q8NDH2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
CCDC168Q8NDH2 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.1■□□□□ 0.81
CCDC168Q8NDH2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CCDC168Q8NDH2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC168Q8NDH2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC168Q8NDH2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC168Q8NDH2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC168Q8NDH2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.09■□□□□ 0.81
CCDC168Q8NDH2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC168Q8NDH2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC168Q8NDH2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC168Q8NDH2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.08■□□□□ 0.81
CCDC168Q8NDH2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms