Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
PGBD3Q8N328 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PGBD3Q8N328 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.14■■□□□ 1.45
PGBD3Q8N328 AP004609.3-201ENST00000610705 1884 ntBASIC24.14■■□□□ 1.45
PGBD3Q8N328 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.14■■□□□ 1.45
PGBD3Q8N328 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PGBD3Q8N328 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.13■■□□□ 1.45
PGBD3Q8N328 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PGBD3Q8N328 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PGBD3Q8N328 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PGBD3Q8N328 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.13■■□□□ 1.45
PGBD3Q8N328 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.13■■□□□ 1.45
PGBD3Q8N328 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
PGBD3Q8N328 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PGBD3Q8N328 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.12■■□□□ 1.45
PGBD3Q8N328 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.12■■□□□ 1.45
PGBD3Q8N328 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PGBD3Q8N328 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PGBD3Q8N328 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.11■■□□□ 1.45
PGBD3Q8N328 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
PGBD3Q8N328 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
PGBD3Q8N328 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PGBD3Q8N328 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.11■■□□□ 1.45
PGBD3Q8N328 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.11■■□□□ 1.45
PGBD3Q8N328 AC137630.3-201ENST00000607245 391 ntBASIC24.11■■□□□ 1.45
PGBD3Q8N328 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PGBD3Q8N328 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PGBD3Q8N328 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.1■■□□□ 1.45
PGBD3Q8N328 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.1■■□□□ 1.45
PGBD3Q8N328 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.1■■□□□ 1.45
PGBD3Q8N328 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.09■■□□□ 1.45
PGBD3Q8N328 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PGBD3Q8N328 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PGBD3Q8N328 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.09■■□□□ 1.45
PGBD3Q8N328 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.09■■□□□ 1.45
PGBD3Q8N328 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.09■■□□□ 1.45
PGBD3Q8N328 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PGBD3Q8N328 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PGBD3Q8N328 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.09■■□□□ 1.45
PGBD3Q8N328 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
PGBD3Q8N328 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
PGBD3Q8N328 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
PGBD3Q8N328 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PGBD3Q8N328 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.07■■□□□ 1.44
PGBD3Q8N328 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PGBD3Q8N328 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PGBD3Q8N328 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PGBD3Q8N328 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.07■■□□□ 1.44
PGBD3Q8N328 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
PGBD3Q8N328 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
PGBD3Q8N328 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PGBD3Q8N328 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.06■■□□□ 1.44
PGBD3Q8N328 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PGBD3Q8N328 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
PGBD3Q8N328 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PGBD3Q8N328 AC021242.3-201ENST00000607598 1377 ntBASIC24.05■■□□□ 1.44
PGBD3Q8N328 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
PGBD3Q8N328 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PGBD3Q8N328 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.05■■□□□ 1.44
PGBD3Q8N328 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PGBD3Q8N328 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.05■■□□□ 1.44
PGBD3Q8N328 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.04■■□□□ 1.44
PGBD3Q8N328 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.04■■□□□ 1.44
PGBD3Q8N328 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PGBD3Q8N328 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PGBD3Q8N328 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
PGBD3Q8N328 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PGBD3Q8N328 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PGBD3Q8N328 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PGBD3Q8N328 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.02■■□□□ 1.44
PGBD3Q8N328 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
PGBD3Q8N328 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PGBD3Q8N328 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
PGBD3Q8N328 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
PGBD3Q8N328 AC092028.1-203ENST00000608262 953 ntBASIC24.02■■□□□ 1.44
PGBD3Q8N328 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PGBD3Q8N328 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.02■■□□□ 1.44
PGBD3Q8N328 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.02■■□□□ 1.43
PGBD3Q8N328 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.02■■□□□ 1.43
PGBD3Q8N328 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PGBD3Q8N328 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PGBD3Q8N328 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
PGBD3Q8N328 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PGBD3Q8N328 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PGBD3Q8N328 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.01■■□□□ 1.43
PGBD3Q8N328 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.01■■□□□ 1.43
PGBD3Q8N328 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.01■■□□□ 1.43
PGBD3Q8N328 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PGBD3Q8N328 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.01■■□□□ 1.43
PGBD3Q8N328 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
PGBD3Q8N328 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24■■□□□ 1.43
PGBD3Q8N328 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24■■□□□ 1.43
PGBD3Q8N328 MIR4281-201ENST00000580852 62 ntBASIC24■■□□□ 1.43
PGBD3Q8N328 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24■■□□□ 1.43
PGBD3Q8N328 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24■■□□□ 1.43
PGBD3Q8N328 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24■■□□□ 1.43
PGBD3Q8N328 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24■■□□□ 1.43
PGBD3Q8N328 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.99■■□□□ 1.43
PGBD3Q8N328 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PGBD3Q8N328 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.99■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms